Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGHV4-28A0A0C4DH34 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 AC087239.1-201ENST00000622671 572 ntBASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGHV4-28A0A0C4DH34 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 MIR572-201ENST00000384983 95 ntBASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 AC068587.7-201ENST00000641602 218 ntBASIC15.79■□□□□ 0.12
IGHV4-28A0A0C4DH34 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 DUSP8P3-201ENST00000399571 1760 ntBASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGHV4-28A0A0C4DH34 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IGHV4-28A0A0C4DH34 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IGHV4-28A0A0C4DH34 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IGHV4-28A0A0C4DH34 AK1-201ENST00000223836 736 ntTSL 3 BASIC15.77■□□□□ 0.12
IGHV4-28A0A0C4DH34 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
IGHV4-28A0A0C4DH34 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.77■□□□□ 0.12
IGHV4-28A0A0C4DH34 AC026271.2-201ENST00000428091 497 ntBASIC15.77■□□□□ 0.12
IGHV4-28A0A0C4DH34 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
IGHV4-28A0A0C4DH34 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
IGHV4-28A0A0C4DH34 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
IGHV4-28A0A0C4DH34 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IGHV4-28A0A0C4DH34 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
IGHV4-28A0A0C4DH34 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.77■□□□□ 0.11
IGHV4-28A0A0C4DH34 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
IGHV4-28A0A0C4DH34 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
IGHV4-28A0A0C4DH34 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.77■□□□□ 0.11
IGHV4-28A0A0C4DH34 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 LTK-203ENST00000453182 2412 ntTSL 2 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 AC012414.1-201ENST00000556676 535 ntBASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 SP2-202ENST00000613139 908 ntTSL 5 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 MIR6084-201ENST00000622012 110 ntBASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 AL358852.1-201ENST00000623174 1268 ntBASIC15.76■□□□□ 0.11
IGHV4-28A0A0C4DH34 AL031602.1-201ENST00000633169 911 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms