Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 AC127496.7-201ENST00000625110 1798 ntBASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 SNX5-217ENST00000606557 1087 ntBASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 REST-206ENST00000612429 1376 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 REST-207ENST00000616975 1370 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV8-4A0A0B4J246 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 Z92544.1-202ENST00000571933 1220 ntBASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 AC021242.3-201ENST00000607598 1377 ntBASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV8-4A0A0B4J246 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 KRT125P-201ENST00000546827 989 ntBASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 MIR6722-201ENST00000617286 78 ntBASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 NFE2L3P1-201ENST00000588207 1959 ntBASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRAV8-4A0A0B4J246 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV8-4A0A0B4J246 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV8-4A0A0B4J246 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV8-4A0A0B4J246 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.21■□□□□ 0.02
TRAV8-4A0A0B4J246 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAV8-4A0A0B4J246 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV8-4A0A0B4J246 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 PRTG-204ENST00000561292 833 ntTSL 3 BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-4A0A0B4J246 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 AC005703.6-201ENST00000623265 1329 ntBASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-4A0A0B4J246 DUSP8P3-201ENST00000399571 1760 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms