Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-2A0A0B4J235 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-2A0A0B4J235 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-2A0A0B4J235 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-2A0A0B4J235 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-2A0A0B4J235 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC14.46□□□□□ -0.09
TRAV13-2A0A0B4J235 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV13-2A0A0B4J235 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TRAV13-2A0A0B4J235 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.46□□□□□ -0.1
TRAV13-2A0A0B4J235 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV13-2A0A0B4J235 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
TRAV13-2A0A0B4J235 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.46□□□□□ -0.1
TRAV13-2A0A0B4J235 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 REST-210ENST00000638187 1334 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 AC010542.4-201ENST00000563151 1910 ntBASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 AC005229.4-201ENST00000610085 2198 ntBASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 DUX4L11-201ENST00000611504 1267 ntBASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 DUX4L12-201ENST00000614593 1267 ntBASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 DUX4L14-201ENST00000621227 1267 ntBASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV13-2A0A0B4J235 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 LINC01521-201ENST00000504184 1943 ntBASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV13-2A0A0B4J235 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 AL157400.5-201ENST00000507624 621 ntBASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 NRG1-221ENST00000614767 762 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV13-2A0A0B4J235 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 STK32C-205ENST00000456004 607 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 SSSCA1-AS1-201ENST00000567594 614 ntBASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV13-2A0A0B4J235 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
TRAV13-2A0A0B4J235 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-2A0A0B4J235 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-2A0A0B4J235 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-2A0A0B4J235 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV13-2A0A0B4J235 AL162393.1-201ENST00000437852 946 ntBASIC14.41□□□□□ -0.1
TRAV13-2A0A0B4J235 RP9P-202ENST00000450133 1212 ntBASIC14.41□□□□□ -0.1
TRAV13-2A0A0B4J235 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAV13-2A0A0B4J235 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAV13-2A0A0B4J235 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV13-2A0A0B4J235 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV13-2A0A0B4J235 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms