Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 SERBP1P1-201ENST00000396021 1160 ntBASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 OR2I1P-207ENST00000453522 948 ntBASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV7-1A0A0A6YYK4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRBV7-1A0A0A6YYK4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV7-1A0A0A6YYK4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV7-1A0A0A6YYK4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRBV7-1A0A0A6YYK4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17■□□□□ 0.31
TRBV7-1A0A0A6YYK4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17■□□□□ 0.31
TRBV7-1A0A0A6YYK4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17■□□□□ 0.31
TRBV7-1A0A0A6YYK4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV7-1A0A0A6YYK4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 CA15P2-201ENST00000611168 834 ntBASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AC136469.2-201ENST00000623944 1028 ntBASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 ECEL1P1-201ENST00000373592 1742 ntBASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.99■□□□□ 0.31
TRBV7-1A0A0A6YYK4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV7-1A0A0A6YYK4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRBV7-1A0A0A6YYK4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV7-1A0A0A6YYK4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.98■□□□□ 0.31
TRBV7-1A0A0A6YYK4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRBV7-1A0A0A6YYK4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.98■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AC087239.1-201ENST00000622671 572 ntBASIC16.98■□□□□ 0.31
TRBV7-1A0A0A6YYK4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV7-1A0A0A6YYK4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
TRBV7-1A0A0A6YYK4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV7-1A0A0A6YYK4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 AL031602.1-201ENST00000633169 911 ntBASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV7-1A0A0A6YYK4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV7-1A0A0A6YYK4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TRBV7-1A0A0A6YYK4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
TRBV7-1A0A0A6YYK4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 AC079834.2-201ENST00000609776 1949 ntBASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV7-1A0A0A6YYK4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms