Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.61■□□□□ 0.25
TRAV8-1A0A0A6YYK1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PVT1_1.1-201ENST00000615125 194 ntBASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV8-1A0A0A6YYK1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 HSD17B1P1-201ENST00000590052 955 ntBASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV8-1A0A0A6YYK1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV8-1A0A0A6YYK1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV8-1A0A0A6YYK1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 AC005229.4-201ENST00000610085 2198 ntBASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.58■□□□□ 0.24
TRAV8-1A0A0A6YYK1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 SLC25A24-204ENST00000569674 2357 ntBASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 LINC01960-201ENST00000563759 1884 ntBASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.57■□□□□ 0.24
TRAV8-1A0A0A6YYK1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-1A0A0A6YYK1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.56■□□□□ 0.24
TRAV8-1A0A0A6YYK1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-1A0A0A6YYK1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRAV8-1A0A0A6YYK1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms