Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 AC009102.2-201ENST00000606772 1639 ntBASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV30A0A087WSZ9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 RARRES2P1-201ENST00000474487 481 ntBASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRAV30A0A087WSZ9 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 AC087742.1-201ENST00000575880 1738 ntBASIC17.13■□□□□ 0.33
TRAV30A0A087WSZ9 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 TSPY9P-201ENST00000440215 945 ntBASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 TSPY11P-201ENST00000442607 1045 ntBASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 LINC01960-201ENST00000563759 1884 ntBASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV30A0A087WSZ9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 AC009299.2-201ENST00000482477 511 ntBASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 AC137767.1-201ENST00000602918 1920 ntBASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 C17orf82-201ENST00000623772 1530 ntBASIC17.11■□□□□ 0.33
TRAV30A0A087WSZ9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 MIR6724-1-201ENST00000616420 92 ntBASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 MIR6724-2-201ENST00000616483 92 ntBASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 MIR6724-4-201ENST00000617390 92 ntBASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 MIR6724-3-201ENST00000622482 92 ntBASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV30A0A087WSZ9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms