Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC12.26□□□□□ -0.45
SCN2BO60939 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SCN2BO60939 KLHL30-201ENST00000409223 3726 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SCN2BO60939 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SCN2BO60939 ITGAX-204ENST00000562918 1521 ntTSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 SNAI1-201ENST00000244050 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SCN2BO60939 SEC14L1-203ENST00000431431 2504 ntTSL 2 BASIC12.26□□□□□ -0.45
SCN2BO60939 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 AC140481.3-201ENST00000450440 1762 ntTSL 2 BASIC12.25□□□□□ -0.45
SCN2BO60939 PKM-222ENST00000568883 1863 ntTSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.25□□□□□ -0.45
SCN2BO60939 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
SCN2BO60939 STXBP1-220ENST00000637521 2068 ntTSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 LINC01987-201ENST00000593118 2281 ntTSL 2 BASIC12.25□□□□□ -0.45
SCN2BO60939 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 AL157838.1-201ENST00000424252 2502 ntTSL 2 BASIC12.25□□□□□ -0.45
SCN2BO60939 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SCN2BO60939 AC022080.1-201ENST00000366255 781 ntBASIC12.25□□□□□ -0.45
SCN2BO60939 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.25□□□□□ -0.45
SCN2BO60939 AP000244.1-201ENST00000424582 201 ntBASIC12.25□□□□□ -0.45
SCN2BO60939 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC12.25□□□□□ -0.45
SCN2BO60939 BRI3P1-201ENST00000440440 378 ntBASIC12.25□□□□□ -0.45
SCN2BO60939 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SCN2BO60939 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
SCN2BO60939 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC12.25□□□□□ -0.45
SCN2BO60939 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.25□□□□□ -0.45
SCN2BO60939 AC100793.3-201ENST00000592440 719 ntTSL 2 BASIC12.25□□□□□ -0.45
SCN2BO60939 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SCN2BO60939 AC106872.11-201ENST00000605838 421 ntBASIC12.25□□□□□ -0.45
SCN2BO60939 AC073352.2-201ENST00000609385 439 ntBASIC12.25□□□□□ -0.45
SCN2BO60939 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC12.25□□□□□ -0.45
SCN2BO60939 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.25□□□□□ -0.45
SCN2BO60939 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC12.25□□□□□ -0.45
SCN2BO60939 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC12.25□□□□□ -0.45
SCN2BO60939 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 CLUHP8-201ENST00000547527 1485 ntBASIC12.25□□□□□ -0.45
SCN2BO60939 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 PAAF1-214ENST00000544552 1612 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC12.25□□□□□ -0.45
SCN2BO60939 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.25□□□□□ -0.45
SCN2BO60939 GRHL3-201ENST00000236255 1870 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 ZWINT-203ENST00000373944 1872 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SCN2BO60939 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SCN2BO60939 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC12.25□□□□□ -0.45
SCN2BO60939 AL121772.1-201ENST00000618303 2335 ntTSL 2 BASIC12.25□□□□□ -0.45
SCN2BO60939 CICP19-201ENST00000632944 2357 ntBASIC12.25□□□□□ -0.45
SCN2BO60939 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SCN2BO60939 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC12.24□□□□□ -0.45
SCN2BO60939 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 ANKRD20A4-201ENST00000357336 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 CHI3L2-201ENST00000369744 1489 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 AS3MT-201ENST00000369880 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 AP000354.1-201ENST00000396982 456 ntBASIC12.24□□□□□ -0.45
SCN2BO60939 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SCN2BO60939 MICU1-202ENST00000398761 2488 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
SCN2BO60939 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms