Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SLC1A1P43005 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
SLC1A1P43005 PRADC1P1-201ENST00000412317 525 ntBASIC13.58□□□□□ -0.24
SLC1A1P43005 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 AL121574.1-201ENST00000415890 419 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC1A1P43005 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC13.58□□□□□ -0.24
SLC1A1P43005 AC018463.1-201ENST00000456674 917 ntBASIC13.58□□□□□ -0.24
SLC1A1P43005 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
SLC1A1P43005 AC090136.2-201ENST00000517809 420 ntBASIC13.58□□□□□ -0.24
SLC1A1P43005 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC1A1P43005 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 MIR4763-201ENST00000581461 92 ntBASIC13.58□□□□□ -0.24
SLC1A1P43005 AC104440.1-201ENST00000605010 343 ntBASIC13.58□□□□□ -0.24
SLC1A1P43005 AC010976.2-201ENST00000609697 852 ntBASIC13.58□□□□□ -0.24
SLC1A1P43005 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.58□□□□□ -0.24
SLC1A1P43005 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 GRB10-202ENST00000357271 2050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC1A1P43005 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
SLC1A1P43005 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC1A1P43005 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 NFE2L1-222ENST00000585291 4390 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 ZBTB44-202ENST00000397753 3951 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SLC1A1P43005 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 AC011511.5-201ENST00000589379 3219 ntBASIC13.58□□□□□ -0.24
SLC1A1P43005 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.58□□□□□ -0.24
SLC1A1P43005 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
SLC1A1P43005 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A1P43005 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A1P43005 PAAF1-214ENST00000544552 1612 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 SNAP25-201ENST00000254976 2053 ntAPPRIS P5 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 AC048382.5-201ENST00000618330 3667 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC1A1P43005 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A1P43005 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A1P43005 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 AC025538.1-201ENST00000510707 1486 ntBASIC13.57□□□□□ -0.24
SLC1A1P43005 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC1A1P43005 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SLC1A1P43005 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A1P43005 COQ4-202ENST00000372875 928 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A1P43005 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SLC1A1P43005 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SLC1A1P43005 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 IDS-203ENST00000428056 1213 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A1P43005 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.57□□□□□ -0.24
SLC1A1P43005 AC092903.1-201ENST00000466506 262 ntBASIC13.57□□□□□ -0.24
SLC1A1P43005 OARD1-214ENST00000486443 764 ntTSL 3 BASIC13.57□□□□□ -0.24
SLC1A1P43005 AC087203.1-201ENST00000532111 1181 ntBASIC13.57□□□□□ -0.24
SLC1A1P43005 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.57□□□□□ -0.24
SLC1A1P43005 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC13.57□□□□□ -0.24
SLC1A1P43005 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC1A1P43005 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC13.57□□□□□ -0.24
SLC1A1P43005 AC105137.3-201ENST00000617588 984 ntBASIC13.57□□□□□ -0.24
SLC1A1P43005 AC244097.1-201ENST00000621631 1216 ntBASIC13.57□□□□□ -0.24
SLC1A1P43005 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A1P43005 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SLC1A1P43005 SIGLEC10-209ENST00000525998 1841 ntTSL 2 BASIC13.57□□□□□ -0.24
SLC1A1P43005 ALDH7A1-224ENST00000636743 2332 ntTSL 5 BASIC13.57□□□□□ -0.24
SLC1A1P43005 MGAT4EP-201ENST00000330493 2810 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 BCO2-202ENST00000361053 1868 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SLC1A1P43005 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 PRAMEF14-201ENST00000334600 1690 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SLC1A1P43005 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SLC1A1P43005 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SLC1A1P43005 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SLC1A1P43005 AL354704.1-201ENST00000629369 1966 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms