Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ADAM19-201ENST00000257527 6481 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 OR4X1-201ENST00000320048 918 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 SSR4-202ENST00000370085 526 ntTSL 2 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 SNU13-204ENST00000402458 462 ntTSL 3 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 ACTBP14-201ENST00000411655 1089 ntBASIC10.57□□□□□ -0.72
RAB40CQ96S21 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 FNTAP2-201ENST00000430308 634 ntBASIC10.57□□□□□ -0.72
RAB40CQ96S21 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 AC005009.2-201ENST00000452471 687 ntTSL 3 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 PRSS3P1-201ENST00000503996 742 ntBASIC10.57□□□□□ -0.72
RAB40CQ96S21 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 SCARNA20.5-201ENST00000516991 142 ntBASIC10.57□□□□□ -0.72
RAB40CQ96S21 PACS1-203ENST00000524815 628 ntTSL 4 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 NAT9-211ENST00000580632 799 ntTSL 3 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 AC100793.3-201ENST00000592440 719 ntTSL 2 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 AL645939.5-201ENST00000606834 243 ntBASIC10.57□□□□□ -0.72
RAB40CQ96S21 MEG3_2.1-201ENST00000611456 105 ntBASIC10.57□□□□□ -0.72
RAB40CQ96S21 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 AC091544.8-201ENST00000619490 361 ntBASIC10.57□□□□□ -0.72
RAB40CQ96S21 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 FCHSD1-201ENST00000435817 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 AC006372.4-201ENST00000624122 1543 ntBASIC10.57□□□□□ -0.72
RAB40CQ96S21 LRRC37A7P-201ENST00000583900 2759 ntBASIC10.57□□□□□ -0.72
RAB40CQ96S21 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RAB40CQ96S21 HOPX-211ENST00000554144 1672 ntTSL 5 BASIC10.57□□□□□ -0.72
RAB40CQ96S21 IL21R-202ENST00000395754 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 CHI3L2-201ENST00000369744 1489 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 ZDHHC9-201ENST00000357166 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 ERBB2-201ENST00000269571 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 DRC1-201ENST00000288710 2491 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 SYCE3-201ENST00000402753 342 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 MIR1247-201ENST00000408206 136 ntBASIC10.56□□□□□ -0.72
RAB40CQ96S21 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 GPAA1P2-201ENST00000417923 928 ntBASIC10.56□□□□□ -0.72
RAB40CQ96S21 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 AKR7A2P1-201ENST00000460134 915 ntBASIC10.56□□□□□ -0.72
RAB40CQ96S21 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 SNORD3B-1-201ENST00000577988 758 ntBASIC10.56□□□□□ -0.72
RAB40CQ96S21 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 DCK-204ENST00000504952 2614 ntTSL 3 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 STYX-201ENST00000354586 4857 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 PRPF6-201ENST00000266079 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
RAB40CQ96S21 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC10.56□□□□□ -0.72
RAB40CQ96S21 AC012358.2-201ENST00000430010 1434 ntBASIC10.56□□□□□ -0.72
RAB40CQ96S21 AC117503.4-201ENST00000623229 1418 ntBASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms