Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
O00370 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
O00370 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC13.86□□□□□ -0.19
O00370 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
O00370 DQX1-202ENST00000404568 2689 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
O00370 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
O00370 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 PTGER4P2-201ENST00000328411 252 ntBASIC13.86□□□□□ -0.19
O00370 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.86□□□□□ -0.19
O00370 RNA5SP84-201ENST00000364740 107 ntBASIC13.86□□□□□ -0.19
O00370 RNA5SP248-201ENST00000365602 127 ntBASIC13.86□□□□□ -0.19
O00370 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC13.86□□□□□ -0.19
O00370 PTGER4P3-201ENST00000458150 252 ntBASIC13.86□□□□□ -0.19
O00370 AADAC-202ENST00000488869 719 ntTSL 2 BASIC13.86□□□□□ -0.19
O00370 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.86□□□□□ -0.19
O00370 AC113391.1-201ENST00000507236 578 ntTSL 4 BASIC13.86□□□□□ -0.19
O00370 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC13.86□□□□□ -0.19
O00370 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC13.86□□□□□ -0.19
O00370 IGLVI-63-201ENST00000524184 384 ntBASIC13.86□□□□□ -0.19
O00370 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.86□□□□□ -0.19
O00370 KNOP1P1-201ENST00000542108 989 ntBASIC13.86□□□□□ -0.19
O00370 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.86□□□□□ -0.19
O00370 MIR4746-201ENST00000579802 71 ntBASIC13.86□□□□□ -0.19
O00370 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC13.86□□□□□ -0.19
O00370 GGNBP1-204ENST00000613113 887 ntBASIC13.86□□□□□ -0.19
O00370 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC13.86□□□□□ -0.19
O00370 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
O00370 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
O00370 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
O00370 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
O00370 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
O00370 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 CASC4P1-201ENST00000456608 1312 ntBASIC13.86□□□□□ -0.19
O00370 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC13.86□□□□□ -0.19
O00370 FHL2-208ENST00000409807 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC13.86□□□□□ -0.19
O00370 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 AL359510.2-201ENST00000624958 2249 ntBASIC13.86□□□□□ -0.19
O00370 EGFLAM-204ENST00000397202 2398 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
O00370 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
O00370 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
O00370 CASS4-202ENST00000434344 2888 ntTSL 2 BASIC13.85□□□□□ -0.19
O00370 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC13.85□□□□□ -0.19
O00370 AL132642.2-201ENST00000623423 1998 ntBASIC13.85□□□□□ -0.19
O00370 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC13.85□□□□□ -0.19
O00370 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC13.85□□□□□ -0.19
O00370 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
O00370 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
O00370 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC13.85□□□□□ -0.19
O00370 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
O00370 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
O00370 TEDDM2P-201ENST00000414169 786 ntBASIC13.85□□□□□ -0.19
O00370 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC13.85□□□□□ -0.19
O00370 AC010677.1-201ENST00000441690 412 ntBASIC13.85□□□□□ -0.19
O00370 AC027612.2-202ENST00000445955 1199 ntBASIC13.85□□□□□ -0.19
O00370 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.85□□□□□ -0.19
O00370 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC13.85□□□□□ -0.19
O00370 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
O00370 KRT18P63-201ENST00000505463 979 ntBASIC13.85□□□□□ -0.19
O00370 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC13.85□□□□□ -0.19
O00370 CASP3-205ENST00000517513 964 ntTSL 5 BASIC13.85□□□□□ -0.19
O00370 AP001360.1-203ENST00000524708 464 ntTSL 3 BASIC13.85□□□□□ -0.19
O00370 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.85□□□□□ -0.19
O00370 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.85□□□□□ -0.19
O00370 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC13.85□□□□□ -0.19
O00370 TSHZ3-202ENST00000558569 441 ntTSL 2 BASIC13.85□□□□□ -0.19
O00370 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC13.85□□□□□ -0.19
O00370 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC13.85□□□□□ -0.19
O00370 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
O00370 AC117500.5-201ENST00000623233 527 ntBASIC13.85□□□□□ -0.19
O00370 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms