Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 AL353759.1-201ENST00000635439 1578 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 ZC3HC1-203ENST00000360708 1676 ntTSL 2 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 ELMO2-201ENST00000290246 3669 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 AL078621.2-201ENST00000419351 698 ntBASIC13.79□□□□□ -0.2
LMO3Q8TAP4 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 HNRNPA1P10-201ENST00000444945 962 ntBASIC13.79□□□□□ -0.2
LMO3Q8TAP4 DLEU1-203ENST00000461527 917 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 RPS19P3-201ENST00000480487 441 ntBASIC13.79□□□□□ -0.2
LMO3Q8TAP4 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 AP005212.2-201ENST00000584979 510 ntBASIC13.79□□□□□ -0.2
LMO3Q8TAP4 SNHG5-211ENST00000587692 1029 ntTSL 3 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 AC048382.6-201ENST00000621980 1223 ntBASIC13.79□□□□□ -0.2
LMO3Q8TAP4 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 LINC00840-201ENST00000431737 1974 ntTSL 2 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 SH3RF2-201ENST00000359120 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LMO3Q8TAP4 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 HDGF-202ENST00000368206 960 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 RBP4-203ENST00000371469 814 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AC064836.1-201ENST00000405197 704 ntBASIC13.78□□□□□ -0.2
LMO3Q8TAP4 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AC092570.1-201ENST00000414446 469 ntBASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 KRT17P4-201ENST00000429445 819 ntBASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AC063924.1-201ENST00000546680 673 ntBASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AC133555.4-201ENST00000569081 152 ntBASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 OR4C3-202ENST00000611380 597 ntBASIC13.78□□□□□ -0.2
LMO3Q8TAP4 HMGB1P24-201ENST00000611897 328 ntBASIC13.78□□□□□ -0.2
LMO3Q8TAP4 PRKN-210ENST00000612540 603 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AC244250.3-201ENST00000620749 366 ntBASIC13.78□□□□□ -0.2
LMO3Q8TAP4 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 PIMREG-206ENST00000572595 1551 ntTSL 3 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 BX005132.1-201ENST00000641403 1580 ntBASIC13.78□□□□□ -0.2
LMO3Q8TAP4 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 HADH-210ENST00000626637 1774 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 LRRC63-202ENST00000446175 2114 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LMO3Q8TAP4 MORN4-203ENST00000478953 2225 ntTSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms