Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 MAX-212ENST00000555932 1673 ntTSL 5 BASIC11.88□□□□□ -0.51
P04436 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
P04436 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.88□□□□□ -0.51
P04436 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC11.88□□□□□ -0.51
P04436 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
P04436 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
P04436 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 AP000343.1-201ENST00000440602 385 ntBASIC11.88□□□□□ -0.51
P04436 RN7SL646P-201ENST00000492969 297 ntBASIC11.88□□□□□ -0.51
P04436 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC11.88□□□□□ -0.51
P04436 AC138409.2-203ENST00000508395 553 ntTSL 4 BASIC11.88□□□□□ -0.51
P04436 SRP19-206ENST00000515463 660 ntTSL 3 BASIC11.88□□□□□ -0.51
P04436 RNA5SP288-201ENST00000516075 93 ntBASIC11.88□□□□□ -0.51
P04436 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC11.88□□□□□ -0.51
P04436 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC11.88□□□□□ -0.51
P04436 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
P04436 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC11.88□□□□□ -0.51
P04436 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC11.88□□□□□ -0.51
P04436 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC11.88□□□□□ -0.51
P04436 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC11.88□□□□□ -0.51
P04436 NEK4P3-201ENST00000604859 544 ntBASIC11.88□□□□□ -0.51
P04436 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC11.88□□□□□ -0.51
P04436 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC11.88□□□□□ -0.51
P04436 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 DDX11L2-201ENST00000437401 1398 ntBASIC11.88□□□□□ -0.51
P04436 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC11.88□□□□□ -0.51
P04436 AC010182.1-201ENST00000548943 2434 ntBASIC11.88□□□□□ -0.51
P04436 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
P04436 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P04436 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.87□□□□□ -0.51
P04436 C1QTNF3-202ENST00000382065 2802 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC11.87□□□□□ -0.51
P04436 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
P04436 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.87□□□□□ -0.51
P04436 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.87□□□□□ -0.51
P04436 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
P04436 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.87□□□□□ -0.51
P04436 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.87□□□□□ -0.51
P04436 DGCR9-201ENST00000609630 2415 ntBASIC11.87□□□□□ -0.51
P04436 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
P04436 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.87□□□□□ -0.51
P04436 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 AC060814.4-201ENST00000594169 2163 ntBASIC11.87□□□□□ -0.51
P04436 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 CSRP2-201ENST00000311083 943 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 NOS2P3-201ENST00000411468 867 ntBASIC11.87□□□□□ -0.51
P04436 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC11.87□□□□□ -0.51
P04436 NOS2P2-201ENST00000426269 867 ntBASIC11.87□□□□□ -0.51
P04436 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC11.87□□□□□ -0.51
P04436 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC11.87□□□□□ -0.51
P04436 AC006328.1-201ENST00000437571 379 ntBASIC11.87□□□□□ -0.51
P04436 P2RX6P-202ENST00000450626 357 ntBASIC11.87□□□□□ -0.51
P04436 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 ALG1L15P-201ENST00000482834 794 ntBASIC11.87□□□□□ -0.51
P04436 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC11.87□□□□□ -0.51
P04436 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC11.87□□□□□ -0.51
P04436 AC080023.2-201ENST00000532615 208 ntBASIC11.87□□□□□ -0.51
P04436 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC11.87□□□□□ -0.51
P04436 CSRP2-203ENST00000547435 632 ntTSL 2 BASIC11.87□□□□□ -0.51
P04436 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC11.87□□□□□ -0.51
P04436 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC11.87□□□□□ -0.51
P04436 EIF5AP2-201ENST00000585668 1047 ntBASIC11.87□□□□□ -0.51
P04436 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC11.87□□□□□ -0.51
P04436 AL357143.1-203ENST00000639750 881 ntBASIC11.87□□□□□ -0.51
P04436 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 GMEB1-201ENST00000294409 1912 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
P04436 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC11.87□□□□□ -0.51
P04436 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.87□□□□□ -0.51
P04436 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 AL359183.1-201ENST00000623796 2132 ntBASIC11.87□□□□□ -0.51
P04436 ENOX2-204ENST00000394363 4174 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
P04436 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
P04436 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC11.87□□□□□ -0.51
P04436 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P04436 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms