Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SPATA6L-202ENST00000381890 1295 ntTSL 5 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 AL357992.1-201ENST00000433442 130 ntTSL 2 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 Z98751.2-201ENST00000468716 451 ntBASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 AC093714.1-201ENST00000470532 1257 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 RN7SL825P-201ENST00000471327 295 ntBASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 CALCP-201ENST00000522108 212 ntBASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 MS4A6A-216ENST00000532169 1136 ntTSL 2 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 AC123768.3-203ENST00000576873 969 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 DPP4-211ENST00000628861 433 ntTSL 5 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 RASGRP4-207ENST00000587738 2293 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 SNRNP35-203ENST00000526639 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 TNRC18P2-201ENST00000417666 2714 ntBASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RIMBP3Q9UFD9 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 TBC1D7-221ENST00000607658 1649 ntTSL 3 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 UBD-203ENST00000377050 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 LINC02561-201ENST00000449457 692 ntTSL 3 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 AC069155.1-201ENST00000452736 575 ntTSL 2 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 FAM214A-208ENST00000562351 2993 ntTSL 5 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 MIR4647-201ENST00000583964 80 ntBASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 AL035660.2-202ENST00000641233 242 ntBASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 KIAA1147-201ENST00000482493 1847 ntTSL 5 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 C11orf1-201ENST00000260276 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 IMPDH1P11-201ENST00000567885 1504 ntBASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RIMBP3Q9UFD9 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 Metazoa_SRP.10-201ENST00000422908 238 ntBASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 GRTP1-AS1-202ENST00000423246 465 ntTSL 5 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 ELF5-203ENST00000429939 637 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 RPSAP38-201ENST00000475442 881 ntBASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 RN7SL191P-201ENST00000484366 305 ntBASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 BOLA2P2-201ENST00000603861 250 ntBASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 C11orf74-211ENST00000617650 937 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 AC012629.4-201ENST00000623327 259 ntBASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 AC005858.2-201ENST00000624721 426 ntBASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 THRB-AS1-209ENST00000628911 850 ntTSL 5 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 APOBEC3B-201ENST00000333467 1533 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 BCL2L12-213ENST00000619007 1630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 THRAP3-203ENST00000469141 3339 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 OR6B3-201ENST00000319423 996 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 AC011247.1-204ENST00000421463 635 ntTSL 3 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 MRPL27-204ENST00000507088 732 ntTSL 3 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 ACTBP2-201ENST00000515712 1123 ntBASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 AC114321.1-201ENST00000520075 533 ntTSL 3 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 ADM-204ENST00000526492 641 ntTSL 3 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 TAOK3-205ENST00000536979 777 ntTSL 2 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 AC034102.7-201ENST00000550840 470 ntTSL 5 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 RN7SL192P-201ENST00000584303 299 ntBASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 IGFL1P1-201ENST00000599950 360 ntBASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 AC078841.1-201ENST00000605782 1183 ntBASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 AC093495.1-213ENST00000629301 913 ntTSL 5 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 OR6B3-202ENST00000641019 1097 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 CYP2F2P-202ENST00000641827 1004 ntBASIC19.22■□□□□ 0.67
RIMBP3Q9UFD9 CEP89-204ENST00000590597 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 SLC26A5-204ENST00000356767 1404 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms