Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 LINC02151-201ENST00000452629 921 ntTSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 RN7SL684P-201ENST00000465665 294 ntBASIC13.81□□□□□ -0.2
LMO3Q8TAP4 AC092896.1-201ENST00000465850 380 ntBASIC13.81□□□□□ -0.2
LMO3Q8TAP4 AC233724.9-201ENST00000511694 407 ntBASIC13.81□□□□□ -0.2
LMO3Q8TAP4 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 KNOP1P1-201ENST00000542108 989 ntBASIC13.81□□□□□ -0.2
LMO3Q8TAP4 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 PCDHGB8P-202ENST00000507007 2873 ntBASIC13.81□□□□□ -0.2
LMO3Q8TAP4 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 FMO3-201ENST00000367755 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 PRPF4-202ENST00000374199 3212 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LMO3Q8TAP4 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AC034238.1-214ENST00000609699 1590 ntTSL 5 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 OPN1MW3-201ENST00000599405 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 HSH2D-206ENST00000613986 1957 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 MRGPRX2-201ENST00000329773 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 HSD3B1-201ENST00000369413 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 PTGER4P2-201ENST00000328411 252 ntBASIC13.8□□□□□ -0.2
LMO3Q8TAP4 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AP001331.1-201ENST00000413008 1015 ntBASIC13.8□□□□□ -0.2
LMO3Q8TAP4 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AC105443.1-201ENST00000433754 712 ntBASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AL451000.1-201ENST00000451300 1186 ntBASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 PTGER4P3-201ENST00000458150 252 ntBASIC13.8□□□□□ -0.2
LMO3Q8TAP4 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AC092535.4-201ENST00000609548 397 ntBASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AC068338.3-201ENST00000617892 418 ntBASIC13.8□□□□□ -0.2
LMO3Q8TAP4 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AL162591.1-201ENST00000424435 1756 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 AL121772.1-201ENST00000618303 2335 ntTSL 2 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 RPL13AP17-204ENST00000450028 1895 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 RBMY2FP-201ENST00000303922 2042 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LMO3Q8TAP4 GREM2-201ENST00000318160 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms