Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
MTHFRP42898 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
MTHFRP42898 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
MTHFRP42898 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 KIR3DL3-201ENST00000291860 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
MTHFRP42898 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 TPM3P7-201ENST00000338274 732 ntBASIC13.6□□□□□ -0.23
MTHFRP42898 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 RPL19P20-201ENST00000415648 591 ntBASIC13.6□□□□□ -0.23
MTHFRP42898 GGT8P-201ENST00000418938 532 ntBASIC13.6□□□□□ -0.23
MTHFRP42898 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC13.6□□□□□ -0.23
MTHFRP42898 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.6□□□□□ -0.23
MTHFRP42898 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC13.6□□□□□ -0.23
MTHFRP42898 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC13.6□□□□□ -0.23
MTHFRP42898 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC13.6□□□□□ -0.23
MTHFRP42898 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC13.6□□□□□ -0.23
MTHFRP42898 AC136475.6-201ENST00000533113 289 ntBASIC13.6□□□□□ -0.23
MTHFRP42898 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 AL121790.2-201ENST00000553425 379 ntTSL 4 BASIC13.6□□□□□ -0.23
MTHFRP42898 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC13.6□□□□□ -0.23
MTHFRP42898 RN7SL678P-201ENST00000579533 299 ntBASIC13.6□□□□□ -0.23
MTHFRP42898 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 FAM223B-202ENST00000598177 713 ntBASIC13.6□□□□□ -0.23
MTHFRP42898 POU5F1-207ENST00000606567 1236 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC13.6□□□□□ -0.23
MTHFRP42898 AC079331.1-201ENST00000623200 1200 ntBASIC13.6□□□□□ -0.23
MTHFRP42898 FAM223A-202ENST00000625204 713 ntBASIC13.6□□□□□ -0.23
MTHFRP42898 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC13.6□□□□□ -0.23
MTHFRP42898 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC13.6□□□□□ -0.23
MTHFRP42898 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.6□□□□□ -0.23
MTHFRP42898 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.6□□□□□ -0.23
MTHFRP42898 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 ZNF114-201ENST00000315849 2206 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 TPD52L3-203ENST00000381428 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
MTHFRP42898 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
MTHFRP42898 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MTHFRP42898 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
MTHFRP42898 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC13.59□□□□□ -0.23
MTHFRP42898 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
MTHFRP42898 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC13.59□□□□□ -0.23
MTHFRP42898 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
MTHFRP42898 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
MTHFRP42898 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
MTHFRP42898 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
MTHFRP42898 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.59□□□□□ -0.23
MTHFRP42898 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC13.59□□□□□ -0.23
MTHFRP42898 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MTHFRP42898 FTH1P19-201ENST00000402402 528 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 AC105935.1-203ENST00000419183 600 ntTSL 3 BASIC13.59□□□□□ -0.23
MTHFRP42898 AL359094.2-201ENST00000420941 750 ntTSL 3 BASIC13.59□□□□□ -0.23
MTHFRP42898 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
MTHFRP42898 HLA-DRB6-202ENST00000437183 1090 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 RPL7AP53-201ENST00000468834 793 ntBASIC13.59□□□□□ -0.23
MTHFRP42898 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC13.59□□□□□ -0.23
MTHFRP42898 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms