Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MIR6727-201ENST00000620702 65 ntBASIC13.9□□□□□ -0.18
O00370 PLS3-210ENST00000626746 216 ntTSL 4 BASIC13.9□□□□□ -0.18
O00370 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC13.9□□□□□ -0.18
O00370 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
O00370 AL121753.2-201ENST00000624581 1461 ntBASIC13.9□□□□□ -0.18
O00370 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
O00370 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC13.9□□□□□ -0.18
O00370 PISD-203ENST00000397500 2194 ntTSL 5 BASIC13.9□□□□□ -0.18
O00370 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
O00370 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
O00370 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
O00370 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
O00370 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
O00370 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
O00370 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
O00370 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
O00370 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
O00370 ATF4P4-201ENST00000393544 1930 ntBASIC13.9□□□□□ -0.18
O00370 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
O00370 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
O00370 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC13.9□□□□□ -0.19
O00370 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
O00370 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 GPR176-201ENST00000299092 3844 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
O00370 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC13.89□□□□□ -0.19
O00370 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC13.89□□□□□ -0.19
O00370 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
O00370 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 PLK4-210ENST00000514379 3060 ntTSL 2 BASIC13.89□□□□□ -0.19
O00370 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC13.89□□□□□ -0.19
O00370 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC13.89□□□□□ -0.19
O00370 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.89□□□□□ -0.19
O00370 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.89□□□□□ -0.19
O00370 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC13.89□□□□□ -0.19
O00370 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.89□□□□□ -0.19
O00370 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC13.89□□□□□ -0.19
O00370 RPL7AP53-201ENST00000468834 793 ntBASIC13.89□□□□□ -0.19
O00370 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
O00370 AC114812.4-201ENST00000506676 757 ntBASIC13.89□□□□□ -0.19
O00370 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.89□□□□□ -0.19
O00370 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC13.89□□□□□ -0.19
O00370 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC13.89□□□□□ -0.19
O00370 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC13.89□□□□□ -0.19
O00370 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.89□□□□□ -0.19
O00370 AC010202.1-201ENST00000551181 405 ntBASIC13.89□□□□□ -0.19
O00370 AC022211.3-201ENST00000584339 400 ntTSL 3 BASIC13.89□□□□□ -0.19
O00370 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC13.89□□□□□ -0.19
O00370 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC13.89□□□□□ -0.19
O00370 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
O00370 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
O00370 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
O00370 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC13.89□□□□□ -0.19
O00370 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
O00370 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC13.89□□□□□ -0.19
O00370 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC13.88□□□□□ -0.19
O00370 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
O00370 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
O00370 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
O00370 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 TMUB2-214ENST00000590235 1569 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC13.88□□□□□ -0.19
O00370 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
O00370 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms