Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 PPA1-206ENST00000625364 644 ntTSL 5 BASIC13.65□□□□□ -0.22
SLC1A1P43005 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SLC1A1P43005 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 CHI3L2-201ENST00000369744 1489 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SLC1A1P43005 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 C10orf105-201ENST00000398786 4730 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 THEMIS3P-201ENST00000416112 1586 ntBASIC13.65□□□□□ -0.22
SLC1A1P43005 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC13.65□□□□□ -0.22
SLC1A1P43005 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 AC016831.5-201ENST00000605249 1998 ntBASIC13.65□□□□□ -0.22
SLC1A1P43005 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 TRIM37-201ENST00000262294 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SLC1A1P43005 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SLC1A1P43005 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 FOXD2-AS1-201ENST00000445551 2509 ntBASIC13.64□□□□□ -0.23
SLC1A1P43005 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC1A1P43005 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC1A1P43005 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 PARGP1-201ENST00000417555 2286 ntBASIC13.64□□□□□ -0.23
SLC1A1P43005 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SLC1A1P43005 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC1A1P43005 AL049597.1-201ENST00000447415 555 ntBASIC13.64□□□□□ -0.23
SLC1A1P43005 LYPLA2P1-203ENST00000447689 696 ntBASIC13.64□□□□□ -0.23
SLC1A1P43005 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC13.64□□□□□ -0.23
SLC1A1P43005 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.64□□□□□ -0.23
SLC1A1P43005 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.64□□□□□ -0.23
SLC1A1P43005 AP003398.1-201ENST00000531124 318 ntBASIC13.64□□□□□ -0.23
SLC1A1P43005 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC1A1P43005 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC13.64□□□□□ -0.23
SLC1A1P43005 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.64□□□□□ -0.23
SLC1A1P43005 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.64□□□□□ -0.23
SLC1A1P43005 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC13.64□□□□□ -0.23
SLC1A1P43005 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 PAM-203ENST00000346918 3302 ntTSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SLC1A1P43005 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC13.64□□□□□ -0.23
SLC1A1P43005 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 AC073957.3-201ENST00000609998 6758 ntBASIC13.64□□□□□ -0.23
SLC1A1P43005 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
SLC1A1P43005 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC13.64□□□□□ -0.23
SLC1A1P43005 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 AL845472.1-202ENST00000624675 4080 ntBASIC13.64□□□□□ -0.23
SLC1A1P43005 AHCYP7-201ENST00000560847 1308 ntBASIC13.64□□□□□ -0.23
SLC1A1P43005 AC116903.2-201ENST00000561674 1304 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SLC1A1P43005 PHB-214ENST00000614445 1952 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC13.63□□□□□ -0.23
SLC1A1P43005 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 HOPX-211ENST00000554144 1672 ntTSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 NBPF17P-201ENST00000401087 2119 ntBASIC13.63□□□□□ -0.23
SLC1A1P43005 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SLC1A1P43005 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SLC1A1P43005 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SLC1A1P43005 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SLC1A1P43005 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC13.63□□□□□ -0.23
SLC1A1P43005 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms