Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 TUSC8-202ENST00000607312 628 ntTSL 4 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 AF129075.2-201ENST00000608809 636 ntBASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 NEAT1_3.1-201ENST00000613347 159 ntBASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 AL450468.2-201ENST00000565955 1889 ntBASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 MRGPRX3-203ENST00000621697 1429 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 HADHB-201ENST00000317799 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 GALNTL6-204ENST00000508122 1755 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 SYCP3-201ENST00000266743 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 CYP4F62P-201ENST00000417310 524 ntBASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 AC084809.1-201ENST00000435733 591 ntTSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 RPL3P1-201ENST00000437106 1211 ntBASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 AL139220.2-215ENST00000453688 654 ntTSL 5 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 TMEM161B-AS1-207ENST00000506584 717 ntTSL 3 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 AC079238.1-201ENST00000509840 1009 ntBASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 PPIAP11-201ENST00000510729 493 ntBASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 AC008429.1-201ENST00000520067 966 ntTSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 IGKV1-13-201ENST00000521705 347 ntBASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 CSAG2-201ENST00000535353 237 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 AC109495.1-201ENST00000568026 551 ntTSL 4 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 RN7SL15P-201ENST00000582825 301 ntBASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 PCAT14-201ENST00000626825 1077 ntTSL 5 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RIMBP3Q9UFD9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AC010969.2-201ENST00000602458 3231 ntBASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 DDX12P-201ENST00000432996 2947 ntBASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 PLAT-204ENST00000429710 1655 ntTSL 2 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AL450998.1-201ENST00000321418 438 ntBASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AC073834.1-201ENST00000357045 590 ntTSL 4 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 NDUFB9P2-201ENST00000431248 507 ntBASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AC245102.1-201ENST00000454989 520 ntBASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AP003390.2-201ENST00000529229 559 ntTSL 4 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 ZNF970P-201ENST00000547456 223 ntBASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 PRSS58-202ENST00000552471 1123 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 LINC01579-206ENST00000556928 657 ntTSL 3 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 MIR4673-201ENST00000584777 59 ntBASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AC063977.4-201ENST00000595913 872 ntBASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AC073254.1-213ENST00000596622 704 ntTSL 5 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AC011458.2-201ENST00000603937 207 ntBASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 MIR6737-201ENST00000617385 70 ntBASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AC003991.1-211ENST00000631117 870 ntTSL 5 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 ZNF132-203ENST00000639285 1200 ntTSL 5 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 AL359641.1-201ENST00000412509 1558 ntBASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RIMBP3Q9UFD9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 REN-201ENST00000272190 1447 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 SPTLC1-202ENST00000337841 946 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 SNCA-202ENST00000345009 1096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 AL353596.1-201ENST00000447508 790 ntTSL 2 BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 RPEP6-201ENST00000546228 626 ntBASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 EHD4-AS1-201ENST00000564168 771 ntTSL 3 BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 PROCR-201ENST00000216968 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 ARR3-205ENST00000620997 1309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RIMBP3Q9UFD9 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RIMBP3Q9UFD9 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms