Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.93□□□□□ -0.18
O00370 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
O00370 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC13.93□□□□□ -0.18
O00370 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 ALX1-201ENST00000316824 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC13.93□□□□□ -0.18
O00370 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
O00370 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 PMF1-201ENST00000368273 884 ntTSL 2 BASIC13.93□□□□□ -0.18
O00370 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
O00370 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 DTX3L-202ENST00000383661 687 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 AL356653.1-201ENST00000402743 360 ntBASIC13.93□□□□□ -0.18
O00370 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.93□□□□□ -0.18
O00370 AC004522.1-201ENST00000419978 654 ntBASIC13.93□□□□□ -0.18
O00370 GAPDHP29-201ENST00000429913 985 ntBASIC13.93□□□□□ -0.18
O00370 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 GOLGA6L16P-201ENST00000441780 1299 ntBASIC13.93□□□□□ -0.18
O00370 AC133141.1-201ENST00000443015 339 ntBASIC13.93□□□□□ -0.18
O00370 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC13.93□□□□□ -0.18
O00370 AC026470.1-201ENST00000478038 846 ntBASIC13.93□□□□□ -0.18
O00370 SEPHS2P1-201ENST00000511618 1162 ntBASIC13.93□□□□□ -0.18
O00370 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC13.93□□□□□ -0.18
O00370 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC13.93□□□□□ -0.18
O00370 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC13.93□□□□□ -0.18
O00370 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC13.93□□□□□ -0.18
O00370 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.93□□□□□ -0.18
O00370 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.93□□□□□ -0.18
O00370 AC123912.6-201ENST00000612657 315 ntBASIC13.93□□□□□ -0.18
O00370 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC13.93□□□□□ -0.18
O00370 AC244097.1-201ENST00000621631 1216 ntBASIC13.93□□□□□ -0.18
O00370 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.93□□□□□ -0.18
O00370 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC13.93□□□□□ -0.18
O00370 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
O00370 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
O00370 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
O00370 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
O00370 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 RXRG-201ENST00000359842 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 ALOX5-201ENST00000374391 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 MAGEA11-202ENST00000355220 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
O00370 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
O00370 CLUHP8-201ENST00000547527 1485 ntBASIC13.93□□□□□ -0.18
O00370 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
O00370 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC13.92□□□□□ -0.18
O00370 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC13.92□□□□□ -0.18
O00370 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC13.92□□□□□ -0.18
O00370 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC13.92□□□□□ -0.18
O00370 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.92□□□□□ -0.18
O00370 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.92□□□□□ -0.18
O00370 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 AC026992.2-203ENST00000563004 2419 ntBASIC13.92□□□□□ -0.18
O00370 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.92□□□□□ -0.18
O00370 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC13.92□□□□□ -0.18
O00370 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
O00370 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC13.92□□□□□ -0.18
O00370 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
O00370 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC13.92□□□□□ -0.18
O00370 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
O00370 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.92□□□□□ -0.18
O00370 IFNWP2-201ENST00000431203 580 ntBASIC13.92□□□□□ -0.18
O00370 CCND3P1-201ENST00000438347 580 ntBASIC13.92□□□□□ -0.18
O00370 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
O00370 AL157792.1-201ENST00000488281 530 ntBASIC13.92□□□□□ -0.18
O00370 AC106047.2-201ENST00000511723 743 ntBASIC13.92□□□□□ -0.18
O00370 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC13.92□□□□□ -0.18
O00370 IGHVII-74-1-201ENST00000517572 241 ntBASIC13.92□□□□□ -0.18
O00370 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
O00370 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC13.92□□□□□ -0.18
O00370 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC13.92□□□□□ -0.18
O00370 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC13.92□□□□□ -0.18
O00370 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms