Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AL137784.3-201ENST00000623858 2288 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 BICD1P1-201ENST00000457832 1222 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 RN7SL480P-201ENST00000581481 294 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 NEK4P3-201ENST00000604859 544 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AC080013.5-201ENST00000607044 679 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AC020904.3-201ENST00000624199 442 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AC245369.7-201ENST00000631386 350 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 FRG2EP-201ENST00000634243 835 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 LINC00643-207ENST00000637212 734 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AL139823.1-201ENST00000641871 1225 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 Z98257.2-202ENST00000641138 1548 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 AGGF1P10-201ENST00000635005 2191 ntBASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
NPIPA3F8WFD2 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 AL359878.1-201ENST00000381466 1886 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 AL157832.2-205ENST00000597245 1649 ntBASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 FHOD3-207ENST00000591635 3035 ntTSL 5 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 C2-209ENST00000452323 1999 ntTSL 2 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
NPIPA3F8WFD2 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms