Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA9Q9Y5G4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA9Q9Y5G4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA9Q9Y5G4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PCDHGA9Q9Y5G4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PCDHGA9Q9Y5G4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA9Q9Y5G4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.55■□□□□ 0.88
PCDHGA9Q9Y5G4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHGA9Q9Y5G4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.55■□□□□ 0.88
PCDHGA9Q9Y5G4 DUSP8P5-201ENST00000422884 1815 ntBASIC20.55■□□□□ 0.88
PCDHGA9Q9Y5G4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 ID1-201ENST00000376105 1233 ntBASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 AC010525.1-201ENST00000585559 441 ntBASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.54■□□□□ 0.88
PCDHGA9Q9Y5G4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA9Q9Y5G4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA9Q9Y5G4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDHGA9Q9Y5G4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA9Q9Y5G4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHGA9Q9Y5G4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA9Q9Y5G4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHGA9Q9Y5G4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA9Q9Y5G4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA9Q9Y5G4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA9Q9Y5G4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHGA9Q9Y5G4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDHGA9Q9Y5G4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA9Q9Y5G4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
PCDHGA9Q9Y5G4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGA9Q9Y5G4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGA9Q9Y5G4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGA9Q9Y5G4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGA9Q9Y5G4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGA9Q9Y5G4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
PCDHGA9Q9Y5G4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHGA9Q9Y5G4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA9Q9Y5G4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA9Q9Y5G4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA9Q9Y5G4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA9Q9Y5G4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PCDHGA9Q9Y5G4 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.5■□□□□ 0.87
PCDHGA9Q9Y5G4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA9Q9Y5G4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA9Q9Y5G4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGA9Q9Y5G4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA9Q9Y5G4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.5■□□□□ 0.87
PCDHGA9Q9Y5G4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA9Q9Y5G4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 491.7 ms