Protein–RNA interactions for Protein: Q9Y4C1

KDM3A, Lysine-specific demethylase 3A, humanhuman

Predictions only

Length 1,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3AQ9Y4C1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
KDM3AQ9Y4C1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
KDM3AQ9Y4C1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
KDM3AQ9Y4C1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
KDM3AQ9Y4C1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
KDM3AQ9Y4C1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.8■■□□□ 1.56
KDM3AQ9Y4C1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
KDM3AQ9Y4C1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
KDM3AQ9Y4C1 AC004687.1-201ENST00000579003 1625 ntBASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 AC133637.1-201ENST00000624115 1537 ntBASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 AC012676.1-201ENST00000574705 1949 ntBASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.79■■□□□ 1.56
KDM3AQ9Y4C1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
KDM3AQ9Y4C1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
KDM3AQ9Y4C1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
KDM3AQ9Y4C1 IRS3P-201ENST00000223076 1006 ntBASIC24.78■■□□□ 1.56
KDM3AQ9Y4C1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.78■■□□□ 1.56
KDM3AQ9Y4C1 AC097381.1-201ENST00000429019 1296 ntBASIC24.78■■□□□ 1.56
KDM3AQ9Y4C1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.78■■□□□ 1.56
KDM3AQ9Y4C1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
KDM3AQ9Y4C1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
KDM3AQ9Y4C1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
KDM3AQ9Y4C1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
KDM3AQ9Y4C1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.76■■□□□ 1.55
KDM3AQ9Y4C1 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
KDM3AQ9Y4C1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
KDM3AQ9Y4C1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.76■■□□□ 1.55
KDM3AQ9Y4C1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
KDM3AQ9Y4C1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
KDM3AQ9Y4C1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.74■■□□□ 1.55
KDM3AQ9Y4C1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.74■■□□□ 1.55
KDM3AQ9Y4C1 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.74■■□□□ 1.55
KDM3AQ9Y4C1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.74■■□□□ 1.55
KDM3AQ9Y4C1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.74■■□□□ 1.55
KDM3AQ9Y4C1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
KDM3AQ9Y4C1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
KDM3AQ9Y4C1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC24.74■■□□□ 1.55
KDM3AQ9Y4C1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.73■■□□□ 1.55
KDM3AQ9Y4C1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
KDM3AQ9Y4C1 C1orf229-201ENST00000623686 2258 ntBASIC24.72■■□□□ 1.55
KDM3AQ9Y4C1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
KDM3AQ9Y4C1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.72■■□□□ 1.55
KDM3AQ9Y4C1 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
KDM3AQ9Y4C1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
KDM3AQ9Y4C1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
KDM3AQ9Y4C1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
KDM3AQ9Y4C1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
KDM3AQ9Y4C1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.71■■□□□ 1.55
KDM3AQ9Y4C1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
KDM3AQ9Y4C1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
KDM3AQ9Y4C1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
KDM3AQ9Y4C1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
KDM3AQ9Y4C1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms