Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ZC3H4Q9UPT8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZC3H4Q9UPT8 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.91■■□□□ 1.9
ZC3H4Q9UPT8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZC3H4Q9UPT8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
ZC3H4Q9UPT8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.91■■□□□ 1.9
ZC3H4Q9UPT8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.91■■□□□ 1.9
ZC3H4Q9UPT8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZC3H4Q9UPT8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.9■■□□□ 1.9
ZC3H4Q9UPT8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ZC3H4Q9UPT8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ZC3H4Q9UPT8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ZC3H4Q9UPT8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.89■■□□□ 1.89
ZC3H4Q9UPT8 PRORSD1P-201ENST00000295112 541 ntBASIC26.89■■□□□ 1.89
ZC3H4Q9UPT8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.89■■□□□ 1.89
ZC3H4Q9UPT8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
ZC3H4Q9UPT8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.89■■□□□ 1.89
ZC3H4Q9UPT8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC26.89■■□□□ 1.89
ZC3H4Q9UPT8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZC3H4Q9UPT8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
ZC3H4Q9UPT8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZC3H4Q9UPT8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZC3H4Q9UPT8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZC3H4Q9UPT8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 AC133552.2-202ENST00000575694 574 ntBASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 AC068587.7-201ENST00000641602 218 ntBASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 AP006294.2-201ENST00000641667 209 ntBASIC26.87■■□□□ 1.89
ZC3H4Q9UPT8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.86■■□□□ 1.89
ZC3H4Q9UPT8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZC3H4Q9UPT8 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZC3H4Q9UPT8 AF201337.1-201ENST00000520239 748 ntBASIC26.86■■□□□ 1.89
ZC3H4Q9UPT8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZC3H4Q9UPT8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.86■■□□□ 1.89
ZC3H4Q9UPT8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
ZC3H4Q9UPT8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZC3H4Q9UPT8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZC3H4Q9UPT8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ZC3H4Q9UPT8 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
ZC3H4Q9UPT8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.85■■□□□ 1.89
ZC3H4Q9UPT8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZC3H4Q9UPT8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
ZC3H4Q9UPT8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ZC3H4Q9UPT8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ZC3H4Q9UPT8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ZC3H4Q9UPT8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ZC3H4Q9UPT8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC26.84■■□□□ 1.89
ZC3H4Q9UPT8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.84■■□□□ 1.89
ZC3H4Q9UPT8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
ZC3H4Q9UPT8 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.84■■□□□ 1.89
ZC3H4Q9UPT8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZC3H4Q9UPT8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZC3H4Q9UPT8 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ZC3H4Q9UPT8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC26.83■■□□□ 1.89
ZC3H4Q9UPT8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZC3H4Q9UPT8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.83■■□□□ 1.89
ZC3H4Q9UPT8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.83■■□□□ 1.89
ZC3H4Q9UPT8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
ZC3H4Q9UPT8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC26.83■■□□□ 1.89
ZC3H4Q9UPT8 SMUG1P1-201ENST00000590640 811 ntBASIC26.83■■□□□ 1.89
ZC3H4Q9UPT8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
ZC3H4Q9UPT8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H4Q9UPT8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H4Q9UPT8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.82■■□□□ 1.88
ZC3H4Q9UPT8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.82■■□□□ 1.88
ZC3H4Q9UPT8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.82■■□□□ 1.88
ZC3H4Q9UPT8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H4Q9UPT8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.82■■□□□ 1.88
ZC3H4Q9UPT8 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZC3H4Q9UPT8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
ZC3H4Q9UPT8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZC3H4Q9UPT8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.81■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms