Protein–RNA interactions for Protein: Q9UPE1

SRPK3, SRSF protein kinase 3, humanhuman

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK3Q9UPE1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 MIR6084-201ENST00000622012 110 ntBASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SRPK3Q9UPE1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
SRPK3Q9UPE1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 AC034268.1-201ENST00000441047 882 ntBASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRPK3Q9UPE1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRPK3Q9UPE1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SRPK3Q9UPE1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRPK3Q9UPE1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.77■□□□□ 0.92
SRPK3Q9UPE1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.77■□□□□ 0.92
SRPK3Q9UPE1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SRPK3Q9UPE1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.77■□□□□ 0.92
SRPK3Q9UPE1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRPK3Q9UPE1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.77■□□□□ 0.92
SRPK3Q9UPE1 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.77■□□□□ 0.92
SRPK3Q9UPE1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SRPK3Q9UPE1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.77■□□□□ 0.91
SRPK3Q9UPE1 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SRPK3Q9UPE1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRPK3Q9UPE1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 LINC02228-203ENST00000641970 1355 ntBASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 AL162430.1-201ENST00000480705 870 ntBASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.75■□□□□ 0.91
SRPK3Q9UPE1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPK3Q9UPE1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPK3Q9UPE1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPK3Q9UPE1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPK3Q9UPE1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SRPK3Q9UPE1 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.74■□□□□ 0.91
SRPK3Q9UPE1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.74■□□□□ 0.91
SRPK3Q9UPE1 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms