Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC069152.1-201ENST00000438030 544 ntBASIC21.93■■□□□ 1.1
NCDNQ9UBB6 GUSBP6-202ENST00000438529 1198 ntBASIC21.93■■□□□ 1.1
NCDNQ9UBB6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NCDNQ9UBB6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.93■■□□□ 1.1
NCDNQ9UBB6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCDNQ9UBB6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.93■■□□□ 1.1
NCDNQ9UBB6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
NCDNQ9UBB6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.93■■□□□ 1.1
NCDNQ9UBB6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.93■■□□□ 1.1
NCDNQ9UBB6 AC133041.1-202ENST00000642053 222 ntBASIC21.93■■□□□ 1.1
NCDNQ9UBB6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 POU5F1P3-201ENST00000428824 1078 ntBASIC21.92■■□□□ 1.1
NCDNQ9UBB6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.92■■□□□ 1.1
NCDNQ9UBB6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NCDNQ9UBB6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 ITM2C-210ENST00000620962 501 ntBASIC21.9■■□□□ 1.1
NCDNQ9UBB6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.9■■□□□ 1.1
NCDNQ9UBB6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NCDNQ9UBB6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
NCDNQ9UBB6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NCDNQ9UBB6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.89■■□□□ 1.09
NCDNQ9UBB6 AC079140.4-201ENST00000507448 529 ntBASIC21.89■■□□□ 1.09
NCDNQ9UBB6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
NCDNQ9UBB6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.89■■□□□ 1.09
NCDNQ9UBB6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.89■■□□□ 1.09
NCDNQ9UBB6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NCDNQ9UBB6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NCDNQ9UBB6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NCDNQ9UBB6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.89■■□□□ 1.09
NCDNQ9UBB6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NCDNQ9UBB6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NCDNQ9UBB6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NCDNQ9UBB6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NCDNQ9UBB6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NCDNQ9UBB6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NCDNQ9UBB6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NCDNQ9UBB6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NCDNQ9UBB6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.88■■□□□ 1.09
NCDNQ9UBB6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NCDNQ9UBB6 SLC6A10P-202ENST00000431994 2058 ntBASIC21.87■■□□□ 1.09
NCDNQ9UBB6 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NCDNQ9UBB6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.87■■□□□ 1.09
NCDNQ9UBB6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NCDNQ9UBB6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 AP006294.2-201ENST00000641667 209 ntBASIC21.86■■□□□ 1.09
NCDNQ9UBB6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 FP325331.1-202ENST00000623531 1380 ntBASIC21.86■■□□□ 1.09
NCDNQ9UBB6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.86■■□□□ 1.09
NCDNQ9UBB6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms