Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC25.07■■□□□ 1.6
COL20A1Q9P218 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL20A1Q9P218 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL20A1Q9P218 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
COL20A1Q9P218 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
COL20A1Q9P218 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL20A1Q9P218 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL20A1Q9P218 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL20A1Q9P218 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL20A1Q9P218 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.06■■□□□ 1.6
COL20A1Q9P218 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.06■■□□□ 1.6
COL20A1Q9P218 CCDC92B-201ENST00000575506 885 ntBASIC25.06■■□□□ 1.6
COL20A1Q9P218 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC25.06■■□□□ 1.6
COL20A1Q9P218 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL20A1Q9P218 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC25.06■■□□□ 1.6
COL20A1Q9P218 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.06■■□□□ 1.6
COL20A1Q9P218 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.05■■□□□ 1.6
COL20A1Q9P218 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL20A1Q9P218 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
COL20A1Q9P218 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
COL20A1Q9P218 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL20A1Q9P218 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.05■■□□□ 1.6
COL20A1Q9P218 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL20A1Q9P218 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL20A1Q9P218 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL20A1Q9P218 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
COL20A1Q9P218 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL20A1Q9P218 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL20A1Q9P218 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
COL20A1Q9P218 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL20A1Q9P218 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL20A1Q9P218 KRT18P5-201ENST00000436075 1291 ntBASIC25.04■■□□□ 1.6
COL20A1Q9P218 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL20A1Q9P218 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL20A1Q9P218 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
COL20A1Q9P218 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL20A1Q9P218 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
COL20A1Q9P218 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL20A1Q9P218 NT5C3AP1-201ENST00000394500 1012 ntBASIC25.03■■□□□ 1.6
COL20A1Q9P218 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.03■■□□□ 1.6
COL20A1Q9P218 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.03■■□□□ 1.6
COL20A1Q9P218 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL20A1Q9P218 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.03■■□□□ 1.6
COL20A1Q9P218 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC25.03■■□□□ 1.6
COL20A1Q9P218 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.03■■□□□ 1.6
COL20A1Q9P218 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL20A1Q9P218 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL20A1Q9P218 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL20A1Q9P218 DUSP8P3-201ENST00000399571 1760 ntBASIC25.03■■□□□ 1.6
COL20A1Q9P218 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.02■■□□□ 1.6
COL20A1Q9P218 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL20A1Q9P218 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
COL20A1Q9P218 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC25.02■■□□□ 1.6
COL20A1Q9P218 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.02■■□□□ 1.6
COL20A1Q9P218 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL20A1Q9P218 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
COL20A1Q9P218 TERF1P2-201ENST00000583350 1212 ntBASIC25.02■■□□□ 1.6
COL20A1Q9P218 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC25.02■■□□□ 1.6
COL20A1Q9P218 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.02■■□□□ 1.6
COL20A1Q9P218 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
COL20A1Q9P218 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.01■■□□□ 1.59
COL20A1Q9P218 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.01■■□□□ 1.59
COL20A1Q9P218 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL20A1Q9P218 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL20A1Q9P218 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
COL20A1Q9P218 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.01■■□□□ 1.59
COL20A1Q9P218 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.01■■□□□ 1.59
COL20A1Q9P218 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
COL20A1Q9P218 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.01■■□□□ 1.59
COL20A1Q9P218 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC25■■□□□ 1.59
COL20A1Q9P218 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL20A1Q9P218 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
COL20A1Q9P218 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL20A1Q9P218 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25■■□□□ 1.59
COL20A1Q9P218 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25■■□□□ 1.59
COL20A1Q9P218 AC068587.7-201ENST00000641602 218 ntBASIC25■■□□□ 1.59
COL20A1Q9P218 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
COL20A1Q9P218 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL20A1Q9P218 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
COL20A1Q9P218 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL20A1Q9P218 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
COL20A1Q9P218 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1.59
COL20A1Q9P218 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
COL20A1Q9P218 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25■■□□□ 1.59
COL20A1Q9P218 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL20A1Q9P218 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.99■■□□□ 1.59
COL20A1Q9P218 AC010141.3-201ENST00000456659 717 ntBASIC24.99■■□□□ 1.59
COL20A1Q9P218 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL20A1Q9P218 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.99■■□□□ 1.59
COL20A1Q9P218 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL20A1Q9P218 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL20A1Q9P218 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.98■■□□□ 1.59
COL20A1Q9P218 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL20A1Q9P218 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL20A1Q9P218 LINC02228-203ENST00000641970 1355 ntBASIC24.98■■□□□ 1.59
COL20A1Q9P218 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL20A1Q9P218 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL20A1Q9P218 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.98■■□□□ 1.59
COL20A1Q9P218 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.98■■□□□ 1.59
COL20A1Q9P218 KRT18P14-201ENST00000534205 1250 ntBASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms