Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.51■□□□□ 0.87
CNIH4Q9P003 AC006455.2-201ENST00000429931 906 ntBASIC20.51■□□□□ 0.87
CNIH4Q9P003 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.51■□□□□ 0.87
CNIH4Q9P003 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
CNIH4Q9P003 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNIH4Q9P003 AC079630.1-202ENST00000618127 1840 ntBASIC20.5■□□□□ 0.87
CNIH4Q9P003 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNIH4Q9P003 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNIH4Q9P003 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNIH4Q9P003 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNIH4Q9P003 DUX4L4-201ENST00000566884 1269 ntBASIC20.5■□□□□ 0.87
CNIH4Q9P003 MIR3181-201ENST00000578512 73 ntBASIC20.5■□□□□ 0.87
CNIH4Q9P003 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNIH4Q9P003 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNIH4Q9P003 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNIH4Q9P003 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CNIH4Q9P003 GUSBP5-202ENST00000510805 1989 ntBASIC20.5■□□□□ 0.87
CNIH4Q9P003 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.5■□□□□ 0.87
CNIH4Q9P003 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.5■□□□□ 0.87
CNIH4Q9P003 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNIH4Q9P003 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNIH4Q9P003 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CNIH4Q9P003 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.49■□□□□ 0.87
CNIH4Q9P003 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.49■□□□□ 0.87
CNIH4Q9P003 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.49■□□□□ 0.87
CNIH4Q9P003 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.49■□□□□ 0.87
CNIH4Q9P003 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.49■□□□□ 0.87
CNIH4Q9P003 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.49■□□□□ 0.87
CNIH4Q9P003 AL355001.2-201ENST00000620617 1191 ntBASIC20.49■□□□□ 0.87
CNIH4Q9P003 LINC01529-204ENST00000636474 1715 ntBASIC20.49■□□□□ 0.87
CNIH4Q9P003 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CNIH4Q9P003 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNIH4Q9P003 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNIH4Q9P003 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNIH4Q9P003 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CNIH4Q9P003 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNIH4Q9P003 pRNA.6-201ENST00000610482 90 ntBASIC20.48■□□□□ 0.87
CNIH4Q9P003 pRNA.5-201ENST00000612139 90 ntBASIC20.48■□□□□ 0.87
CNIH4Q9P003 pRNA.11-201ENST00000618423 90 ntBASIC20.48■□□□□ 0.87
CNIH4Q9P003 pRNA.13-201ENST00000619112 90 ntBASIC20.48■□□□□ 0.87
CNIH4Q9P003 AC136469.2-201ENST00000623944 1028 ntBASIC20.48■□□□□ 0.87
CNIH4Q9P003 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CNIH4Q9P003 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CNIH4Q9P003 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNIH4Q9P003 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNIH4Q9P003 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.47■□□□□ 0.87
CNIH4Q9P003 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNIH4Q9P003 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNIH4Q9P003 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.47■□□□□ 0.87
CNIH4Q9P003 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNIH4Q9P003 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CNIH4Q9P003 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNIH4Q9P003 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.47■□□□□ 0.87
CNIH4Q9P003 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.47■□□□□ 0.87
CNIH4Q9P003 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNIH4Q9P003 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNIH4Q9P003 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNIH4Q9P003 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNIH4Q9P003 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.47■□□□□ 0.87
CNIH4Q9P003 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CNIH4Q9P003 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.46■□□□□ 0.87
CNIH4Q9P003 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.46■□□□□ 0.87
CNIH4Q9P003 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
CNIH4Q9P003 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CNIH4Q9P003 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CNIH4Q9P003 LINC00565-201ENST00000562710 2331 ntBASIC20.45■□□□□ 0.87
CNIH4Q9P003 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNIH4Q9P003 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CNIH4Q9P003 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.45■□□□□ 0.86
CNIH4Q9P003 AC142381.2-201ENST00000566120 298 ntBASIC20.45■□□□□ 0.86
CNIH4Q9P003 MIR4767-201ENST00000582827 78 ntBASIC20.45■□□□□ 0.86
CNIH4Q9P003 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.45■□□□□ 0.86
CNIH4Q9P003 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNIH4Q9P003 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.45■□□□□ 0.86
CNIH4Q9P003 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNIH4Q9P003 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNIH4Q9P003 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNIH4Q9P003 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNIH4Q9P003 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNIH4Q9P003 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.44■□□□□ 0.86
CNIH4Q9P003 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CNIH4Q9P003 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.44■□□□□ 0.86
CNIH4Q9P003 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNIH4Q9P003 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNIH4Q9P003 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.44■□□□□ 0.86
CNIH4Q9P003 AL499627.2-201ENST00000606283 725 ntBASIC20.44■□□□□ 0.86
CNIH4Q9P003 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.44■□□□□ 0.86
CNIH4Q9P003 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.44■□□□□ 0.86
CNIH4Q9P003 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNIH4Q9P003 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNIH4Q9P003 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNIH4Q9P003 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
CNIH4Q9P003 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNIH4Q9P003 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CNIH4Q9P003 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNIH4Q9P003 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CNIH4Q9P003 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.44■□□□□ 0.86
CNIH4Q9P003 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
CNIH4Q9P003 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNIH4Q9P003 CLDN5-201ENST00000403084 2357 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms