Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 SLC29A4P1-201ENST00000398760 971 ntBASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 AC008687.6-201ENST00000596318 630 ntBASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 AC231657.2-201ENST00000624556 255 ntBASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.23■■■□□ 2.11
TFCP2L1Q9NZI6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
TFCP2L1Q9NZI6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TFCP2L1Q9NZI6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TFCP2L1Q9NZI6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TFCP2L1Q9NZI6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TFCP2L1Q9NZI6 AC069152.1-201ENST00000438030 544 ntBASIC28.22■■■□□ 2.11
TFCP2L1Q9NZI6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC28.22■■■□□ 2.11
TFCP2L1Q9NZI6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC28.22■■■□□ 2.11
TFCP2L1Q9NZI6 AC005181.1-201ENST00000604782 1256 ntBASIC28.22■■■□□ 2.11
TFCP2L1Q9NZI6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
TFCP2L1Q9NZI6 AC144652.1-201ENST00000609974 1624 ntBASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 AC007322.1-201ENST00000426983 750 ntBASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC28.21■■■□□ 2.11
TFCP2L1Q9NZI6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.2■■■□□ 2.11
TFCP2L1Q9NZI6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
TFCP2L1Q9NZI6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.1
TFCP2L1Q9NZI6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC28.2■■■□□ 2.1
TFCP2L1Q9NZI6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC28.2■■■□□ 2.1
TFCP2L1Q9NZI6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC28.2■■■□□ 2.1
TFCP2L1Q9NZI6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TFCP2L1Q9NZI6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC28.2■■■□□ 2.1
TFCP2L1Q9NZI6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
TFCP2L1Q9NZI6 AC145676.1-201ENST00000514988 2004 ntBASIC28.19■■■□□ 2.1
TFCP2L1Q9NZI6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
TFCP2L1Q9NZI6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TFCP2L1Q9NZI6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TFCP2L1Q9NZI6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28.19■■■□□ 2.1
TFCP2L1Q9NZI6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC28.19■■■□□ 2.1
TFCP2L1Q9NZI6 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC28.19■■■□□ 2.1
TFCP2L1Q9NZI6 SMUG1P1-201ENST00000590640 811 ntBASIC28.19■■■□□ 2.1
TFCP2L1Q9NZI6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TFCP2L1Q9NZI6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC28.19■■■□□ 2.1
TFCP2L1Q9NZI6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
TFCP2L1Q9NZI6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 DUX4L16-201ENST00000555130 1264 ntBASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
TFCP2L1Q9NZI6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TFCP2L1Q9NZI6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TFCP2L1Q9NZI6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
TFCP2L1Q9NZI6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TFCP2L1Q9NZI6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
TFCP2L1Q9NZI6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TFCP2L1Q9NZI6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
TFCP2L1Q9NZI6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.16■■■□□ 2.1
TFCP2L1Q9NZI6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TFCP2L1Q9NZI6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TFCP2L1Q9NZI6 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC28.16■■■□□ 2.1
TFCP2L1Q9NZI6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TFCP2L1Q9NZI6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TFCP2L1Q9NZI6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.16■■■□□ 2.1
TFCP2L1Q9NZI6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC28.16■■■□□ 2.1
TFCP2L1Q9NZI6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.16■■■□□ 2.1
TFCP2L1Q9NZI6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TFCP2L1Q9NZI6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.16■■■□□ 2.1
TFCP2L1Q9NZI6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TFCP2L1Q9NZI6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
TFCP2L1Q9NZI6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC28.15■■■□□ 2.1
TFCP2L1Q9NZI6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.15■■■□□ 2.1
TFCP2L1Q9NZI6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TFCP2L1Q9NZI6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC28.15■■■□□ 2.1
TFCP2L1Q9NZI6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC28.15■■■□□ 2.1
TFCP2L1Q9NZI6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TFCP2L1Q9NZI6 AC087239.1-201ENST00000622671 572 ntBASIC28.15■■■□□ 2.1
TFCP2L1Q9NZI6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC28.15■■■□□ 2.1
TFCP2L1Q9NZI6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms