Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRMT13Q9NUP7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.36■■□□□ 1.49
TRMT13Q9NUP7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRMT13Q9NUP7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 SMUG1P1-201ENST00000590640 811 ntBASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 AC104771.1-201ENST00000603335 964 ntBASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRMT13Q9NUP7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
TRMT13Q9NUP7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRMT13Q9NUP7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRMT13Q9NUP7 CROCCP5-201ENST00000436658 830 ntBASIC24.33■■□□□ 1.49
TRMT13Q9NUP7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.33■■□□□ 1.49
TRMT13Q9NUP7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TRMT13Q9NUP7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.33■■□□□ 1.49
TRMT13Q9NUP7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.33■■□□□ 1.48
TRMT13Q9NUP7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
TRMT13Q9NUP7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRMT13Q9NUP7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.32■■□□□ 1.48
TRMT13Q9NUP7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.32■■□□□ 1.48
TRMT13Q9NUP7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TRMT13Q9NUP7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRMT13Q9NUP7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.32■■□□□ 1.48
TRMT13Q9NUP7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRMT13Q9NUP7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 KRT19P1-201ENST00000405746 1186 ntBASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRMT13Q9NUP7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 AC006970.2-201ENST00000450065 779 ntBASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 AC068587.7-201ENST00000641602 218 ntBASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.3■■□□□ 1.48
TRMT13Q9NUP7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRMT13Q9NUP7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRMT13Q9NUP7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.29■■□□□ 1.48
TRMT13Q9NUP7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.29■■□□□ 1.48
TRMT13Q9NUP7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TRMT13Q9NUP7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TRMT13Q9NUP7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
TRMT13Q9NUP7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRMT13Q9NUP7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
TRMT13Q9NUP7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRMT13Q9NUP7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRMT13Q9NUP7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TRMT13Q9NUP7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRMT13Q9NUP7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
TRMT13Q9NUP7 AC010141.3-201ENST00000456659 717 ntBASIC24.28■■□□□ 1.48
TRMT13Q9NUP7 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.28■■□□□ 1.48
TRMT13Q9NUP7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TRMT13Q9NUP7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRMT13Q9NUP7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
TRMT13Q9NUP7 AL355802.2-201ENST00000402069 882 ntBASIC24.27■■□□□ 1.48
TRMT13Q9NUP7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRMT13Q9NUP7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.27■■□□□ 1.48
TRMT13Q9NUP7 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TRMT13Q9NUP7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.27■■□□□ 1.48
TRMT13Q9NUP7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.27■■□□□ 1.48
TRMT13Q9NUP7 AL109923.1-201ENST00000618799 583 ntBASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms