Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHAF3Q9NRP4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHAF3Q9NRP4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHAF3Q9NRP4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.13■□□□□ 0.81
SDHAF3Q9NRP4 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.13■□□□□ 0.81
SDHAF3Q9NRP4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
SDHAF3Q9NRP4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.13■□□□□ 0.81
SDHAF3Q9NRP4 AC068587.7-201ENST00000641602 218 ntBASIC20.13■□□□□ 0.81
SDHAF3Q9NRP4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHAF3Q9NRP4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 AC233992.3-201ENST00000607491 485 ntBASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAF3Q9NRP4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SDHAF3Q9NRP4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.11■□□□□ 0.81
SDHAF3Q9NRP4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHAF3Q9NRP4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHAF3Q9NRP4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.11■□□□□ 0.81
SDHAF3Q9NRP4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHAF3Q9NRP4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHAF3Q9NRP4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.11■□□□□ 0.81
SDHAF3Q9NRP4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHAF3Q9NRP4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.11■□□□□ 0.81
SDHAF3Q9NRP4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHAF3Q9NRP4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 AC027682.1-201ENST00000562846 899 ntBASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SDHAF3Q9NRP4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 AC008764.7-201ENST00000593779 1081 ntBASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 AC005837.3-201ENST00000612163 286 ntBASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 AC087239.1-201ENST00000622671 572 ntBASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAF3Q9NRP4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.08■□□□□ 0.81
SDHAF3Q9NRP4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SDHAF3Q9NRP4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SDHAF3Q9NRP4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SDHAF3Q9NRP4 MIR638-201ENST00000385237 100 ntBASIC20.08■□□□□ 0.81
SDHAF3Q9NRP4 SLC47A1P1-202ENST00000449666 945 ntBASIC20.08■□□□□ 0.81
SDHAF3Q9NRP4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.08■□□□□ 0.81
SDHAF3Q9NRP4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SDHAF3Q9NRP4 AC142381.2-201ENST00000566120 298 ntBASIC20.08■□□□□ 0.81
SDHAF3Q9NRP4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SDHAF3Q9NRP4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SDHAF3Q9NRP4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
SDHAF3Q9NRP4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
SDHAF3Q9NRP4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 AC126544.1-201ENST00000580842 1059 ntBASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAF3Q9NRP4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.06■□□□□ 0.8
SDHAF3Q9NRP4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms