Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
MRM3Q9HC36 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
MRM3Q9HC36 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MRM3Q9HC36 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MRM3Q9HC36 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MRM3Q9HC36 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
MRM3Q9HC36 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MRM3Q9HC36 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MRM3Q9HC36 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MRM3Q9HC36 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
MRM3Q9HC36 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
MRM3Q9HC36 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MRM3Q9HC36 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MRM3Q9HC36 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
MRM3Q9HC36 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.03■■□□□ 1.12
MRM3Q9HC36 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.03■■□□□ 1.12
MRM3Q9HC36 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
MRM3Q9HC36 AC006455.2-201ENST00000429931 906 ntBASIC22.03■■□□□ 1.12
MRM3Q9HC36 AL512631.2-201ENST00000604634 923 ntBASIC22.03■■□□□ 1.12
MRM3Q9HC36 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.03■■□□□ 1.12
MRM3Q9HC36 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MRM3Q9HC36 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MRM3Q9HC36 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.02■■□□□ 1.12
MRM3Q9HC36 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MRM3Q9HC36 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MRM3Q9HC36 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.02■■□□□ 1.12
MRM3Q9HC36 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MRM3Q9HC36 pRNA.6-201ENST00000610482 90 ntBASIC22.02■■□□□ 1.12
MRM3Q9HC36 pRNA.5-201ENST00000612139 90 ntBASIC22.02■■□□□ 1.12
MRM3Q9HC36 pRNA.11-201ENST00000618423 90 ntBASIC22.02■■□□□ 1.12
MRM3Q9HC36 pRNA.13-201ENST00000619112 90 ntBASIC22.02■■□□□ 1.12
MRM3Q9HC36 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
MRM3Q9HC36 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
MRM3Q9HC36 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
MRM3Q9HC36 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
MRM3Q9HC36 AC133637.1-201ENST00000624115 1537 ntBASIC22.01■■□□□ 1.11
MRM3Q9HC36 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
MRM3Q9HC36 AC099791.2-201ENST00000605725 427 ntBASIC22.01■■□□□ 1.11
MRM3Q9HC36 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.01■■□□□ 1.11
MRM3Q9HC36 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
MRM3Q9HC36 AC137767.1-201ENST00000602918 1920 ntBASIC22.01■■□□□ 1.11
MRM3Q9HC36 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
MRM3Q9HC36 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
MRM3Q9HC36 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
MRM3Q9HC36 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.01■■□□□ 1.11
MRM3Q9HC36 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
MRM3Q9HC36 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
MRM3Q9HC36 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22■■□□□ 1.11
MRM3Q9HC36 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
MRM3Q9HC36 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
MRM3Q9HC36 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
MRM3Q9HC36 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
MRM3Q9HC36 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22■■□□□ 1.11
MRM3Q9HC36 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22■■□□□ 1.11
MRM3Q9HC36 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22■■□□□ 1.11
MRM3Q9HC36 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22■■□□□ 1.11
MRM3Q9HC36 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC22■■□□□ 1.11
MRM3Q9HC36 CLDN5-201ENST00000403084 2357 ntBASIC22■■□□□ 1.11
MRM3Q9HC36 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22■■□□□ 1.11
MRM3Q9HC36 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
MRM3Q9HC36 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22■■□□□ 1.11
MRM3Q9HC36 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MRM3Q9HC36 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MRM3Q9HC36 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MRM3Q9HC36 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
MRM3Q9HC36 SRD5A1P1-201ENST00000442297 786 ntBASIC21.99■■□□□ 1.11
MRM3Q9HC36 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.99■■□□□ 1.11
MRM3Q9HC36 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MRM3Q9HC36 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.99■■□□□ 1.11
MRM3Q9HC36 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
MRM3Q9HC36 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
MRM3Q9HC36 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
MRM3Q9HC36 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.98■■□□□ 1.11
MRM3Q9HC36 AC092171.4-201ENST00000609130 632 ntBASIC21.98■■□□□ 1.11
MRM3Q9HC36 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.98■■□□□ 1.11
MRM3Q9HC36 AL031602.1-201ENST00000633169 911 ntBASIC21.98■■□□□ 1.11
MRM3Q9HC36 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.98■■□□□ 1.11
MRM3Q9HC36 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.98■■□□□ 1.11
MRM3Q9HC36 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MRM3Q9HC36 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.97■■□□□ 1.11
MRM3Q9HC36 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
MRM3Q9HC36 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MRM3Q9HC36 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
MRM3Q9HC36 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.97■■□□□ 1.11
MRM3Q9HC36 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.97■■□□□ 1.11
MRM3Q9HC36 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.97■■□□□ 1.11
MRM3Q9HC36 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.97■■□□□ 1.11
MRM3Q9HC36 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
MRM3Q9HC36 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms