Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
ATP6V0A4Q9HBG4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6V0A4Q9HBG4 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6V0A4Q9HBG4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.45■■□□□ 1.5
ATP6V0A4Q9HBG4 AL162430.1-201ENST00000480705 870 ntBASIC24.45■■□□□ 1.5
ATP6V0A4Q9HBG4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.45■■□□□ 1.5
ATP6V0A4Q9HBG4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.45■■□□□ 1.5
ATP6V0A4Q9HBG4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.45■■□□□ 1.5
ATP6V0A4Q9HBG4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.45■■□□□ 1.5
ATP6V0A4Q9HBG4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.45■■□□□ 1.5
ATP6V0A4Q9HBG4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
ATP6V0A4Q9HBG4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6V0A4Q9HBG4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6V0A4Q9HBG4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 IGHV3-19-201ENST00000521488 291 ntBASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.42■■□□□ 1.5
ATP6V0A4Q9HBG4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
ATP6V0A4Q9HBG4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V0A4Q9HBG4 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.41■■□□□ 1.5
ATP6V0A4Q9HBG4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V0A4Q9HBG4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V0A4Q9HBG4 AP005435.1-201ENST00000529293 1178 ntBASIC24.41■■□□□ 1.5
ATP6V0A4Q9HBG4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V0A4Q9HBG4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V0A4Q9HBG4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
ATP6V0A4Q9HBG4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6V0A4Q9HBG4 TSPY26P-201ENST00000476365 1326 ntBASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6V0A4Q9HBG4 AC012676.1-201ENST00000574705 1949 ntBASIC24.39■■□□□ 1.5
ATP6V0A4Q9HBG4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
ATP6V0A4Q9HBG4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.39■■□□□ 1.49
ATP6V0A4Q9HBG4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.39■■□□□ 1.49
ATP6V0A4Q9HBG4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V0A4Q9HBG4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.39■■□□□ 1.49
ATP6V0A4Q9HBG4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6V0A4Q9HBG4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
ATP6V0A4Q9HBG4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V0A4Q9HBG4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V0A4Q9HBG4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V0A4Q9HBG4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V0A4Q9HBG4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP6V0A4Q9HBG4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6V0A4Q9HBG4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP6V0A4Q9HBG4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP6V0A4Q9HBG4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.38■■□□□ 1.49
ATP6V0A4Q9HBG4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
ATP6V0A4Q9HBG4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms