Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 pRNA.5-201ENST00000612139 90 ntBASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 pRNA.11-201ENST00000618423 90 ntBASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 pRNA.13-201ENST00000619112 90 ntBASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POLR1BQ9H9Y6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR1BQ9H9Y6 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
POLR1BQ9H9Y6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
POLR1BQ9H9Y6 AL358852.1-201ENST00000623174 1268 ntBASIC21.58■■□□□ 1.05
POLR1BQ9H9Y6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
POLR1BQ9H9Y6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
POLR1BQ9H9Y6 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
POLR1BQ9H9Y6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
POLR1BQ9H9Y6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.58■■□□□ 1.04
POLR1BQ9H9Y6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
POLR1BQ9H9Y6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
POLR1BQ9H9Y6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 DUX4L2-201ENST00000561772 1275 ntBASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 DUX4L6-201ENST00000626483 1275 ntBASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 DUX4L1-201ENST00000627662 1275 ntBASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 DUX4L8-201ENST00000629013 1275 ntBASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 DUX4L3-201ENST00000630187 1275 ntBASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 DUX4L7-201ENST00000630678 1275 ntBASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 DUX4L5-201ENST00000630834 1275 ntBASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 LINC00565-201ENST00000562710 2331 ntBASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
POLR1BQ9H9Y6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.56■■□□□ 1.04
POLR1BQ9H9Y6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.56■■□□□ 1.04
POLR1BQ9H9Y6 AC027612.3-201ENST00000413684 1047 ntBASIC21.56■■□□□ 1.04
POLR1BQ9H9Y6 AC123595.1-201ENST00000440769 1046 ntBASIC21.56■■□□□ 1.04
POLR1BQ9H9Y6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
POLR1BQ9H9Y6 AC092437.1-201ENST00000624794 1048 ntBASIC21.56■■□□□ 1.04
POLR1BQ9H9Y6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR1BQ9H9Y6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
POLR1BQ9H9Y6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
POLR1BQ9H9Y6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.55■■□□□ 1.04
POLR1BQ9H9Y6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
POLR1BQ9H9Y6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 EP400NL-214ENST00000641289 2402 ntBASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.53■■□□□ 1.04
POLR1BQ9H9Y6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms