Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
VRTNQ9H8Y1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 LINC01960-201ENST00000563759 1884 ntBASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.52■■□□□ 1.36
VRTNQ9H8Y1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.51■■□□□ 1.35
VRTNQ9H8Y1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
VRTNQ9H8Y1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.51■■□□□ 1.35
VRTNQ9H8Y1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.51■■□□□ 1.35
VRTNQ9H8Y1 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.51■■□□□ 1.35
VRTNQ9H8Y1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
VRTNQ9H8Y1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.51■■□□□ 1.35
VRTNQ9H8Y1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.5■■□□□ 1.35
VRTNQ9H8Y1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VRTNQ9H8Y1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.5■■□□□ 1.35
VRTNQ9H8Y1 IGHV3-19-201ENST00000521488 291 ntBASIC23.5■■□□□ 1.35
VRTNQ9H8Y1 AC126544.1-201ENST00000580842 1059 ntBASIC23.5■■□□□ 1.35
VRTNQ9H8Y1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
VRTNQ9H8Y1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
VRTNQ9H8Y1 C9orf163-202ENST00000624034 2573 ntBASIC23.49■■□□□ 1.35
VRTNQ9H8Y1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
VRTNQ9H8Y1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
VRTNQ9H8Y1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
VRTNQ9H8Y1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
VRTNQ9H8Y1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.49■■□□□ 1.35
VRTNQ9H8Y1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.49■■□□□ 1.35
VRTNQ9H8Y1 AC087742.1-201ENST00000575880 1738 ntBASIC23.49■■□□□ 1.35
VRTNQ9H8Y1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.49■■□□□ 1.35
VRTNQ9H8Y1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
VRTNQ9H8Y1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.49■■□□□ 1.35
VRTNQ9H8Y1 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VRTNQ9H8Y1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VRTNQ9H8Y1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VRTNQ9H8Y1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
VRTNQ9H8Y1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.48■■□□□ 1.35
VRTNQ9H8Y1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.48■■□□□ 1.35
VRTNQ9H8Y1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.48■■□□□ 1.35
VRTNQ9H8Y1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
VRTNQ9H8Y1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
VRTNQ9H8Y1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
VRTNQ9H8Y1 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VRTNQ9H8Y1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.47■■□□□ 1.35
VRTNQ9H8Y1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VRTNQ9H8Y1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
VRTNQ9H8Y1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VRTNQ9H8Y1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.47■■□□□ 1.35
VRTNQ9H8Y1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.47■■□□□ 1.35
VRTNQ9H8Y1 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VRTNQ9H8Y1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VRTNQ9H8Y1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VRTNQ9H8Y1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
VRTNQ9H8Y1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.46■■□□□ 1.35
VRTNQ9H8Y1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.46■■□□□ 1.35
VRTNQ9H8Y1 ESRRAP2-201ENST00000418437 1549 ntBASIC23.46■■□□□ 1.35
VRTNQ9H8Y1 GRAMD4P2-201ENST00000423297 1097 ntBASIC23.46■■□□□ 1.35
VRTNQ9H8Y1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
VRTNQ9H8Y1 AC010141.3-201ENST00000456659 717 ntBASIC23.46■■□□□ 1.35
VRTNQ9H8Y1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.45■■□□□ 1.35
VRTNQ9H8Y1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
VRTNQ9H8Y1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
VRTNQ9H8Y1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.45■■□□□ 1.35
VRTNQ9H8Y1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VRTNQ9H8Y1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
VRTNQ9H8Y1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
VRTNQ9H8Y1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.45■■□□□ 1.34
VRTNQ9H8Y1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VRTNQ9H8Y1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.45■■□□□ 1.34
VRTNQ9H8Y1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VRTNQ9H8Y1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VRTNQ9H8Y1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
VRTNQ9H8Y1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
VRTNQ9H8Y1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
VRTNQ9H8Y1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
VRTNQ9H8Y1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
VRTNQ9H8Y1 AC087239.1-201ENST00000622671 572 ntBASIC23.44■■□□□ 1.34
VRTNQ9H8Y1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VRTNQ9H8Y1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
VRTNQ9H8Y1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VRTNQ9H8Y1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VRTNQ9H8Y1 C1orf229-201ENST00000623686 2258 ntBASIC23.43■■□□□ 1.34
VRTNQ9H8Y1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VRTNQ9H8Y1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.43■■□□□ 1.34
VRTNQ9H8Y1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms