Protein–RNA interactions for Protein: Q9H320

VCX, Variable charge X-linked protein 1, humanhuman

Predictions only

Length 206 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCXQ9H320 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCXQ9H320 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
VCXQ9H320 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
VCXQ9H320 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
VCXQ9H320 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCXQ9H320 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCXQ9H320 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.96■□□□□ 0.95
VCXQ9H320 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCXQ9H320 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
VCXQ9H320 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCXQ9H320 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCXQ9H320 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VCXQ9H320 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VCXQ9H320 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
VCXQ9H320 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
VCXQ9H320 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
VCXQ9H320 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCXQ9H320 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
VCXQ9H320 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
VCXQ9H320 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCXQ9H320 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VCXQ9H320 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VCXQ9H320 AC025884.2-201ENST00000553429 711 ntBASIC20.95■□□□□ 0.94
VCXQ9H320 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VCXQ9H320 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.95■□□□□ 0.94
VCXQ9H320 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCXQ9H320 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
VCXQ9H320 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.94■□□□□ 0.94
VCXQ9H320 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.94■□□□□ 0.94
VCXQ9H320 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCXQ9H320 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCXQ9H320 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VCXQ9H320 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VCXQ9H320 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCXQ9H320 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.93■□□□□ 0.94
VCXQ9H320 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
VCXQ9H320 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCXQ9H320 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VCXQ9H320 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.93■□□□□ 0.94
VCXQ9H320 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.93■□□□□ 0.94
VCXQ9H320 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
VCXQ9H320 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCXQ9H320 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCXQ9H320 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.93■□□□□ 0.94
VCXQ9H320 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
VCXQ9H320 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VCXQ9H320 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
VCXQ9H320 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
VCXQ9H320 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCXQ9H320 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCXQ9H320 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
VCXQ9H320 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
VCXQ9H320 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCXQ9H320 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.92■□□□□ 0.94
VCXQ9H320 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.92■□□□□ 0.94
VCXQ9H320 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
VCXQ9H320 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCXQ9H320 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VCXQ9H320 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VCXQ9H320 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.92■□□□□ 0.94
VCXQ9H320 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCXQ9H320 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCXQ9H320 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCXQ9H320 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
VCXQ9H320 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCXQ9H320 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCXQ9H320 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
VCXQ9H320 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCXQ9H320 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.91■□□□□ 0.94
VCXQ9H320 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VCXQ9H320 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
VCXQ9H320 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCXQ9H320 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
VCXQ9H320 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VCXQ9H320 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
VCXQ9H320 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.91■□□□□ 0.94
VCXQ9H320 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
VCXQ9H320 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.9■□□□□ 0.94
VCXQ9H320 FAM99A-202ENST00000538190 1989 ntBASIC20.9■□□□□ 0.94
VCXQ9H320 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCXQ9H320 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VCXQ9H320 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCXQ9H320 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VCXQ9H320 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCXQ9H320 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
VCXQ9H320 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.9■□□□□ 0.94
VCXQ9H320 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VCXQ9H320 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
VCXQ9H320 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VCXQ9H320 AL157384.1-201ENST00000445995 2473 ntBASIC20.89■□□□□ 0.94
VCXQ9H320 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VCXQ9H320 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
VCXQ9H320 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VCXQ9H320 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
VCXQ9H320 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.89■□□□□ 0.93
VCXQ9H320 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
VCXQ9H320 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
VCXQ9H320 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
VCXQ9H320 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VCXQ9H320 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms