Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.69■■□□□ 1.38
CDH23Q9H251 ALDH1A3-203ENST00000557963 1670 ntBASIC23.69■■□□□ 1.38
CDH23Q9H251 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH23Q9H251 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH23Q9H251 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH23Q9H251 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.68■■□□□ 1.38
CDH23Q9H251 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH23Q9H251 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
CDH23Q9H251 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH23Q9H251 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
CDH23Q9H251 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDH23Q9H251 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CDH23Q9H251 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CDH23Q9H251 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.68■■□□□ 1.38
CDH23Q9H251 SLC29A4P1-201ENST00000398760 971 ntBASIC23.68■■□□□ 1.38
CDH23Q9H251 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC23.68■■□□□ 1.38
CDH23Q9H251 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
CDH23Q9H251 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.67■■□□□ 1.38
CDH23Q9H251 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDH23Q9H251 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDH23Q9H251 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDH23Q9H251 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDH23Q9H251 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDH23Q9H251 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.67■■□□□ 1.38
CDH23Q9H251 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.67■■□□□ 1.38
CDH23Q9H251 SLC7A5P1-201ENST00000568957 537 ntBASIC23.67■■□□□ 1.38
CDH23Q9H251 SMUG1P1-201ENST00000590640 811 ntBASIC23.67■■□□□ 1.38
CDH23Q9H251 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.67■■□□□ 1.38
CDH23Q9H251 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDH23Q9H251 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDH23Q9H251 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.67■■□□□ 1.38
CDH23Q9H251 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.67■■□□□ 1.38
CDH23Q9H251 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.67■■□□□ 1.38
CDH23Q9H251 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CDH23Q9H251 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDH23Q9H251 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDH23Q9H251 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.66■■□□□ 1.38
CDH23Q9H251 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDH23Q9H251 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CDH23Q9H251 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.66■■□□□ 1.38
CDH23Q9H251 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.66■■□□□ 1.38
CDH23Q9H251 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.66■■□□□ 1.38
CDH23Q9H251 AC092118.2-201ENST00000613495 667 ntBASIC23.66■■□□□ 1.38
CDH23Q9H251 AC231657.2-201ENST00000624556 255 ntBASIC23.66■■□□□ 1.38
CDH23Q9H251 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDH23Q9H251 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.65■■□□□ 1.38
CDH23Q9H251 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDH23Q9H251 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
CDH23Q9H251 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDH23Q9H251 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.65■■□□□ 1.38
CDH23Q9H251 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDH23Q9H251 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDH23Q9H251 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDH23Q9H251 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
CDH23Q9H251 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.64■■□□□ 1.38
CDH23Q9H251 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDH23Q9H251 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.64■■□□□ 1.38
CDH23Q9H251 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDH23Q9H251 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.64■■□□□ 1.38
CDH23Q9H251 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.64■■□□□ 1.38
CDH23Q9H251 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDH23Q9H251 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDH23Q9H251 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
CDH23Q9H251 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.64■■□□□ 1.37
CDH23Q9H251 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.64■■□□□ 1.37
CDH23Q9H251 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.64■■□□□ 1.37
CDH23Q9H251 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.64■■□□□ 1.37
CDH23Q9H251 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDH23Q9H251 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.64■■□□□ 1.37
CDH23Q9H251 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDH23Q9H251 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.63■■□□□ 1.37
CDH23Q9H251 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.63■■□□□ 1.37
CDH23Q9H251 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDH23Q9H251 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CDH23Q9H251 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDH23Q9H251 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDH23Q9H251 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
CDH23Q9H251 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDH23Q9H251 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDH23Q9H251 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDH23Q9H251 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDH23Q9H251 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.63■■□□□ 1.37
CDH23Q9H251 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDH23Q9H251 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDH23Q9H251 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.62■■□□□ 1.37
CDH23Q9H251 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDH23Q9H251 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.62■■□□□ 1.37
CDH23Q9H251 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDH23Q9H251 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDH23Q9H251 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CDH23Q9H251 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.62■■□□□ 1.37
CDH23Q9H251 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDH23Q9H251 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDH23Q9H251 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.62■■□□□ 1.37
CDH23Q9H251 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDH23Q9H251 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.61■■□□□ 1.37
CDH23Q9H251 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.61■■□□□ 1.37
CDH23Q9H251 MIR6089-201ENST00000616698 64 ntBASIC23.61■■□□□ 1.37
CDH23Q9H251 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDH23Q9H251 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms