Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
NUCKS1Q9H1E3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
NUCKS1Q9H1E3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
NUCKS1Q9H1E3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.8■■□□□ 1.4
NUCKS1Q9H1E3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
NUCKS1Q9H1E3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NUCKS1Q9H1E3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.8■■□□□ 1.4
NUCKS1Q9H1E3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NUCKS1Q9H1E3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
NUCKS1Q9H1E3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.78■■□□□ 1.4
NUCKS1Q9H1E3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
NUCKS1Q9H1E3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
NUCKS1Q9H1E3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NUCKS1Q9H1E3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NUCKS1Q9H1E3 MIR6724-1-201ENST00000616420 92 ntBASIC23.77■■□□□ 1.4
NUCKS1Q9H1E3 MIR6724-2-201ENST00000616483 92 ntBASIC23.77■■□□□ 1.4
NUCKS1Q9H1E3 MIR6724-4-201ENST00000617390 92 ntBASIC23.77■■□□□ 1.4
NUCKS1Q9H1E3 MIR6724-3-201ENST00000622482 92 ntBASIC23.77■■□□□ 1.4
NUCKS1Q9H1E3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NUCKS1Q9H1E3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
NUCKS1Q9H1E3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
NUCKS1Q9H1E3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NUCKS1Q9H1E3 LINC01960-201ENST00000563759 1884 ntBASIC23.75■■□□□ 1.39
NUCKS1Q9H1E3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NUCKS1Q9H1E3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NUCKS1Q9H1E3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.75■■□□□ 1.39
NUCKS1Q9H1E3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
NUCKS1Q9H1E3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NUCKS1Q9H1E3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.74■■□□□ 1.39
NUCKS1Q9H1E3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.74■■□□□ 1.39
NUCKS1Q9H1E3 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.74■■□□□ 1.39
NUCKS1Q9H1E3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.74■■□□□ 1.39
NUCKS1Q9H1E3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
NUCKS1Q9H1E3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
NUCKS1Q9H1E3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.74■■□□□ 1.39
NUCKS1Q9H1E3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NUCKS1Q9H1E3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NUCKS1Q9H1E3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
NUCKS1Q9H1E3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms