Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
RTFDC1Q9BY42 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
RTFDC1Q9BY42 KRT19P1-201ENST00000405746 1186 ntBASIC27.04■■□□□ 1.92
RTFDC1Q9BY42 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RTFDC1Q9BY42 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RTFDC1Q9BY42 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RTFDC1Q9BY42 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
RTFDC1Q9BY42 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RTFDC1Q9BY42 SMUG1P1-201ENST00000590640 811 ntBASIC27.03■■□□□ 1.92
RTFDC1Q9BY42 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC27.03■■□□□ 1.92
RTFDC1Q9BY42 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RTFDC1Q9BY42 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.03■■□□□ 1.92
RTFDC1Q9BY42 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RTFDC1Q9BY42 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
RTFDC1Q9BY42 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTFDC1Q9BY42 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
RTFDC1Q9BY42 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC27.01■■□□□ 1.91
RTFDC1Q9BY42 NCF1B-203ENST00000435988 1254 ntBASIC27.01■■□□□ 1.91
RTFDC1Q9BY42 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RTFDC1Q9BY42 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC27.01■■□□□ 1.91
RTFDC1Q9BY42 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTFDC1Q9BY42 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC27.01■■□□□ 1.91
RTFDC1Q9BY42 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RTFDC1Q9BY42 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RTFDC1Q9BY42 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTFDC1Q9BY42 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTFDC1Q9BY42 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC27■■□□□ 1.91
RTFDC1Q9BY42 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RTFDC1Q9BY42 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC27■■□□□ 1.91
RTFDC1Q9BY42 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27■■□□□ 1.91
RTFDC1Q9BY42 METTL26-203ENST00000397664 604 ntTSL 2 BASIC27■■□□□ 1.91
RTFDC1Q9BY42 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
RTFDC1Q9BY42 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC27■■□□□ 1.91
RTFDC1Q9BY42 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC27■■□□□ 1.91
RTFDC1Q9BY42 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27■■□□□ 1.91
RTFDC1Q9BY42 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC27■■□□□ 1.91
RTFDC1Q9BY42 CPT2-209ENST00000636935 803 ntTSL 5 BASIC27■■□□□ 1.91
RTFDC1Q9BY42 EI24-211ENST00000534546 1544 ntTSL 2 BASIC27■■□□□ 1.91
RTFDC1Q9BY42 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTFDC1Q9BY42 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTFDC1Q9BY42 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
RTFDC1Q9BY42 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTFDC1Q9BY42 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RTFDC1Q9BY42 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTFDC1Q9BY42 ABHD17AP1-201ENST00000358206 933 ntBASIC26.99■■□□□ 1.91
RTFDC1Q9BY42 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC26.99■■□□□ 1.91
RTFDC1Q9BY42 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.99■■□□□ 1.91
RTFDC1Q9BY42 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.99■■□□□ 1.91
RTFDC1Q9BY42 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RTFDC1Q9BY42 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RTFDC1Q9BY42 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
RTFDC1Q9BY42 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RTFDC1Q9BY42 AC006970.2-201ENST00000450065 779 ntBASIC26.98■■□□□ 1.91
RTFDC1Q9BY42 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RTFDC1Q9BY42 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.98■■□□□ 1.91
RTFDC1Q9BY42 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.98■■□□□ 1.91
RTFDC1Q9BY42 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RTFDC1Q9BY42 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTFDC1Q9BY42 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTFDC1Q9BY42 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
RTFDC1Q9BY42 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTFDC1Q9BY42 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.97■■□□□ 1.91
RTFDC1Q9BY42 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RTFDC1Q9BY42 AL109923.1-201ENST00000618799 583 ntBASIC26.97■■□□□ 1.91
RTFDC1Q9BY42 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.97■■□□□ 1.91
RTFDC1Q9BY42 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RTFDC1Q9BY42 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RTFDC1Q9BY42 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RTFDC1Q9BY42 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.96■■□□□ 1.91
RTFDC1Q9BY42 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC26.96■■□□□ 1.91
RTFDC1Q9BY42 KRT18P11-201ENST00000435214 1283 ntBASIC26.96■■□□□ 1.91
RTFDC1Q9BY42 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC26.96■■□□□ 1.91
RTFDC1Q9BY42 AC011767.1-201ENST00000617410 1153 ntBASIC26.96■■□□□ 1.91
RTFDC1Q9BY42 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RTFDC1Q9BY42 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RTFDC1Q9BY42 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC26.96■■□□□ 1.91
RTFDC1Q9BY42 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.9
RTFDC1Q9BY42 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RTFDC1Q9BY42 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RTFDC1Q9BY42 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RTFDC1Q9BY42 AC010141.3-201ENST00000456659 717 ntBASIC26.95■■□□□ 1.9
RTFDC1Q9BY42 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.95■■□□□ 1.9
RTFDC1Q9BY42 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC26.95■■□□□ 1.9
RTFDC1Q9BY42 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms