Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
NICN1Q9BSH3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NICN1Q9BSH3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NICN1Q9BSH3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NICN1Q9BSH3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NICN1Q9BSH3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.82■□□□□ 0.6
NICN1Q9BSH3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NICN1Q9BSH3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NICN1Q9BSH3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NICN1Q9BSH3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NICN1Q9BSH3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.8■□□□□ 0.6
NICN1Q9BSH3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NICN1Q9BSH3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NICN1Q9BSH3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.8■□□□□ 0.6
NICN1Q9BSH3 MIR4508-201ENST00000584178 70 ntBASIC18.8■□□□□ 0.6
NICN1Q9BSH3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.8■□□□□ 0.6
NICN1Q9BSH3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.8■□□□□ 0.6
NICN1Q9BSH3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.8■□□□□ 0.6
NICN1Q9BSH3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NICN1Q9BSH3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NICN1Q9BSH3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NICN1Q9BSH3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NICN1Q9BSH3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NICN1Q9BSH3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NICN1Q9BSH3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NICN1Q9BSH3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NICN1Q9BSH3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NICN1Q9BSH3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NICN1Q9BSH3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.79■□□□□ 0.6
NICN1Q9BSH3 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NICN1Q9BSH3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NICN1Q9BSH3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NICN1Q9BSH3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.77■□□□□ 0.6
NICN1Q9BSH3 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NICN1Q9BSH3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NICN1Q9BSH3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NICN1Q9BSH3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NICN1Q9BSH3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.77■□□□□ 0.6
NICN1Q9BSH3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.77■□□□□ 0.6
NICN1Q9BSH3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.77■□□□□ 0.6
NICN1Q9BSH3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NICN1Q9BSH3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NICN1Q9BSH3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
NICN1Q9BSH3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NICN1Q9BSH3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.76■□□□□ 0.59
NICN1Q9BSH3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NICN1Q9BSH3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NICN1Q9BSH3 AC103834.1-201ENST00000520383 144 ntBASIC18.76■□□□□ 0.59
NICN1Q9BSH3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NICN1Q9BSH3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NICN1Q9BSH3 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NICN1Q9BSH3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 LINC01529-204ENST00000636474 1715 ntBASIC18.75■□□□□ 0.59
NICN1Q9BSH3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NICN1Q9BSH3 KRT8P33-201ENST00000508125 1423 ntBASIC18.74■□□□□ 0.59
NICN1Q9BSH3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms