Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LITAFQ99732 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC14.66□□□□□ -0.06
LITAFQ99732 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LITAFQ99732 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC14.66□□□□□ -0.06
LITAFQ99732 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LITAFQ99732 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC14.66□□□□□ -0.06
LITAFQ99732 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC14.66□□□□□ -0.06
LITAFQ99732 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
LITAFQ99732 AC026202.3-201ENST00000600805 1127 ntBASIC14.66□□□□□ -0.06
LITAFQ99732 CR559946.2-201ENST00000623684 991 ntBASIC14.66□□□□□ -0.06
LITAFQ99732 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
LITAFQ99732 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
LITAFQ99732 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
LITAFQ99732 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LITAFQ99732 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LITAFQ99732 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LITAFQ99732 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LITAFQ99732 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
LITAFQ99732 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC14.65□□□□□ -0.06
LITAFQ99732 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LITAFQ99732 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC14.65□□□□□ -0.06
LITAFQ99732 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC14.65□□□□□ -0.06
LITAFQ99732 LINC01006-201ENST00000333319 2292 ntBASIC14.65□□□□□ -0.06
LITAFQ99732 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.65□□□□□ -0.06
LITAFQ99732 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LITAFQ99732 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LITAFQ99732 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
LITAFQ99732 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC14.65□□□□□ -0.06
LITAFQ99732 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LITAFQ99732 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LITAFQ99732 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LITAFQ99732 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.65□□□□□ -0.06
LITAFQ99732 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC14.65□□□□□ -0.06
LITAFQ99732 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
LITAFQ99732 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.64□□□□□ -0.07
LITAFQ99732 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LITAFQ99732 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LITAFQ99732 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LITAFQ99732 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.64□□□□□ -0.07
LITAFQ99732 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LITAFQ99732 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC14.64□□□□□ -0.07
LITAFQ99732 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LITAFQ99732 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LITAFQ99732 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LITAFQ99732 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LITAFQ99732 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LITAFQ99732 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LITAFQ99732 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LITAFQ99732 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LITAFQ99732 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LITAFQ99732 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LITAFQ99732 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
LITAFQ99732 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.63□□□□□ -0.07
LITAFQ99732 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LITAFQ99732 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.63□□□□□ -0.07
LITAFQ99732 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LITAFQ99732 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LITAFQ99732 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LITAFQ99732 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC14.63□□□□□ -0.07
LITAFQ99732 ECEL1P2-201ENST00000461596 1295 ntBASIC14.63□□□□□ -0.07
LITAFQ99732 RNF166-209ENST00000567844 633 ntTSL 5 BASIC14.63□□□□□ -0.07
LITAFQ99732 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
LITAFQ99732 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC14.63□□□□□ -0.07
LITAFQ99732 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.63□□□□□ -0.07
LITAFQ99732 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
LITAFQ99732 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LITAFQ99732 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LITAFQ99732 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LITAFQ99732 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LITAFQ99732 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC14.62□□□□□ -0.07
LITAFQ99732 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LITAFQ99732 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.62□□□□□ -0.07
LITAFQ99732 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LITAFQ99732 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 AL592295.1-201ENST00000400984 884 ntBASIC14.62□□□□□ -0.07
LITAFQ99732 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
LITAFQ99732 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LITAFQ99732 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LITAFQ99732 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms