Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
FOXN4Q96NZ1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN4Q96NZ1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
FOXN4Q96NZ1 LINC00565-201ENST00000562710 2331 ntBASIC19.64■□□□□ 0.74
FOXN4Q96NZ1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
FOXN4Q96NZ1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
FOXN4Q96NZ1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN4Q96NZ1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
FOXN4Q96NZ1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
FOXN4Q96NZ1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
FOXN4Q96NZ1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.63■□□□□ 0.73
FOXN4Q96NZ1 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.63■□□□□ 0.73
FOXN4Q96NZ1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN4Q96NZ1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
FOXN4Q96NZ1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.62■□□□□ 0.73
FOXN4Q96NZ1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 LINC00526-201ENST00000581067 1875 ntBASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 AC080038.3-201ENST00000623346 1952 ntBASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
FOXN4Q96NZ1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 FP325331.1-202ENST00000623531 1380 ntBASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 AC004687.1-201ENST00000579003 1625 ntBASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.6■□□□□ 0.73
FOXN4Q96NZ1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 AL139246.5-201ENST00000606645 996 ntBASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 C17orf82-201ENST00000623772 1530 ntBASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 AC087742.1-201ENST00000575880 1738 ntBASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
FOXN4Q96NZ1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms