Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.58■■□□□ 1.37
ZNF558Q96NG5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.58■■□□□ 1.37
ZNF558Q96NG5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.58■■□□□ 1.37
ZNF558Q96NG5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ZNF558Q96NG5 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
ZNF558Q96NG5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
ZNF558Q96NG5 AP004607.4-201ENST00000530158 1459 ntBASIC23.57■■□□□ 1.36
ZNF558Q96NG5 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZNF558Q96NG5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.57■■□□□ 1.36
ZNF558Q96NG5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZNF558Q96NG5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZNF558Q96NG5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.57■■□□□ 1.36
ZNF558Q96NG5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZNF558Q96NG5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
ZNF558Q96NG5 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.57■■□□□ 1.36
ZNF558Q96NG5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ZNF558Q96NG5 AC004854.2-201ENST00000608450 1441 ntBASIC23.57■■□□□ 1.36
ZNF558Q96NG5 AC020928.2-201ENST00000588717 2197 ntBASIC23.57■■□□□ 1.36
ZNF558Q96NG5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZNF558Q96NG5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
ZNF558Q96NG5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
ZNF558Q96NG5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZNF558Q96NG5 HLA-L-209ENST00000420110 1011 ntBASIC23.56■■□□□ 1.36
ZNF558Q96NG5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZNF558Q96NG5 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ZNF558Q96NG5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
ZNF558Q96NG5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
ZNF558Q96NG5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.55■■□□□ 1.36
ZNF558Q96NG5 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.55■■□□□ 1.36
ZNF558Q96NG5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
ZNF558Q96NG5 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.55■■□□□ 1.36
ZNF558Q96NG5 LINC01124-201ENST00000409786 2117 ntBASIC23.55■■□□□ 1.36
ZNF558Q96NG5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.55■■□□□ 1.36
ZNF558Q96NG5 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.55■■□□□ 1.36
ZNF558Q96NG5 SMUG1P1-201ENST00000590640 811 ntBASIC23.55■■□□□ 1.36
ZNF558Q96NG5 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.55■■□□□ 1.36
ZNF558Q96NG5 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ZNF558Q96NG5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.55■■□□□ 1.36
ZNF558Q96NG5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZNF558Q96NG5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.54■■□□□ 1.36
ZNF558Q96NG5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.54■■□□□ 1.36
ZNF558Q96NG5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ZNF558Q96NG5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
ZNF558Q96NG5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
ZNF558Q96NG5 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ZNF558Q96NG5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.54■■□□□ 1.36
ZNF558Q96NG5 AL353803.4-201ENST00000565882 1934 ntBASIC23.54■■□□□ 1.36
ZNF558Q96NG5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 AC073111.5-205ENST00000641717 521 ntBASIC23.53■■□□□ 1.36
ZNF558Q96NG5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ZNF558Q96NG5 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.52■■□□□ 1.36
ZNF558Q96NG5 KRT19P1-201ENST00000405746 1186 ntBASIC23.52■■□□□ 1.36
ZNF558Q96NG5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.52■■□□□ 1.36
ZNF558Q96NG5 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.52■■□□□ 1.36
ZNF558Q96NG5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.52■■□□□ 1.36
ZNF558Q96NG5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.52■■□□□ 1.36
ZNF558Q96NG5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.52■■□□□ 1.36
ZNF558Q96NG5 RAP2CP1-201ENST00000605103 478 ntBASIC23.52■■□□□ 1.36
ZNF558Q96NG5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
ZNF558Q96NG5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF558Q96NG5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF558Q96NG5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF558Q96NG5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.51■■□□□ 1.35
ZNF558Q96NG5 CDCA4P2-201ENST00000441182 718 ntBASIC23.51■■□□□ 1.35
ZNF558Q96NG5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.51■■□□□ 1.35
ZNF558Q96NG5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.51■■□□□ 1.35
ZNF558Q96NG5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ZNF558Q96NG5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.51■■□□□ 1.35
ZNF558Q96NG5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
ZNF558Q96NG5 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.51■■□□□ 1.35
ZNF558Q96NG5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZNF558Q96NG5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZNF558Q96NG5 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ZNF558Q96NG5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.5■■□□□ 1.35
ZNF558Q96NG5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
ZNF558Q96NG5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.5■■□□□ 1.35
ZNF558Q96NG5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.5■■□□□ 1.35
ZNF558Q96NG5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.5■■□□□ 1.35
ZNF558Q96NG5 BID-214ENST00000617586 542 ntTSL 5 BASIC23.5■■□□□ 1.35
ZNF558Q96NG5 AC004812.2-201ENST00000611079 2094 ntBASIC23.5■■□□□ 1.35
ZNF558Q96NG5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
ZNF558Q96NG5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZNF558Q96NG5 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
ZNF558Q96NG5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.49■■□□□ 1.35
ZNF558Q96NG5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.49■■□□□ 1.35
ZNF558Q96NG5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC23.49■■□□□ 1.35
ZNF558Q96NG5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.49■■□□□ 1.35
ZNF558Q96NG5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.49■■□□□ 1.35
ZNF558Q96NG5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms