Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
USP47Q96K76 LINC01960-201ENST00000563759 1884 ntBASIC30.97■■■□□ 2.55
USP47Q96K76 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC30.96■■■□□ 2.55
USP47Q96K76 EI24-211ENST00000534546 1544 ntTSL 2 BASIC30.96■■■□□ 2.55
USP47Q96K76 EBPL-204ENST00000378272 766 ntTSL 3 BASIC30.96■■■□□ 2.55
USP47Q96K76 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC30.96■■■□□ 2.55
USP47Q96K76 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
USP47Q96K76 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
USP47Q96K76 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
USP47Q96K76 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
USP47Q96K76 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.96■■■□□ 2.55
USP47Q96K76 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
USP47Q96K76 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
USP47Q96K76 AC105265.2-201ENST00000467189 838 ntBASIC30.95■■■□□ 2.55
USP47Q96K76 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
USP47Q96K76 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC30.95■■■□□ 2.54
USP47Q96K76 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
USP47Q96K76 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC30.94■■■□□ 2.54
USP47Q96K76 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
USP47Q96K76 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC30.94■■■□□ 2.54
USP47Q96K76 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
USP47Q96K76 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
USP47Q96K76 RBM38-205ENST00000440234 686 ntTSL 2 BASIC30.93■■■□□ 2.54
USP47Q96K76 IGHV3-19-201ENST00000521488 291 ntBASIC30.93■■■□□ 2.54
USP47Q96K76 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
USP47Q96K76 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
USP47Q96K76 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
USP47Q96K76 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC30.93■■■□□ 2.54
USP47Q96K76 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC30.93■■■□□ 2.54
USP47Q96K76 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
USP47Q96K76 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
USP47Q96K76 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
USP47Q96K76 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC30.92■■■□□ 2.54
USP47Q96K76 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
USP47Q96K76 AC126544.1-201ENST00000580842 1059 ntBASIC30.92■■■□□ 2.54
USP47Q96K76 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
USP47Q96K76 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
USP47Q96K76 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC30.92■■■□□ 2.54
USP47Q96K76 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC30.92■■■□□ 2.54
USP47Q96K76 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC30.92■■■□□ 2.54
USP47Q96K76 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.92■■■□□ 2.54
USP47Q96K76 GRAMD4P2-201ENST00000423297 1097 ntBASIC30.92■■■□□ 2.54
USP47Q96K76 AP005435.1-201ENST00000529293 1178 ntBASIC30.92■■■□□ 2.54
USP47Q96K76 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC30.92■■■□□ 2.54
USP47Q96K76 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
USP47Q96K76 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
USP47Q96K76 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC30.91■■■□□ 2.54
USP47Q96K76 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
USP47Q96K76 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
USP47Q96K76 ZNRF2P3-201ENST00000424200 374 ntBASIC30.91■■■□□ 2.54
USP47Q96K76 STOX2-205ENST00000513034 807 ntTSL 3 BASIC30.91■■■□□ 2.54
USP47Q96K76 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC30.91■■■□□ 2.54
USP47Q96K76 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC30.91■■■□□ 2.54
USP47Q96K76 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
USP47Q96K76 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP47Q96K76 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP47Q96K76 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC30.9■■■□□ 2.54
USP47Q96K76 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP47Q96K76 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
USP47Q96K76 AC087742.1-201ENST00000575880 1738 ntBASIC30.9■■■□□ 2.54
USP47Q96K76 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC30.9■■■□□ 2.54
USP47Q96K76 C1orf229-201ENST00000623686 2258 ntBASIC30.9■■■□□ 2.54
USP47Q96K76 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
USP47Q96K76 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
USP47Q96K76 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
USP47Q96K76 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
USP47Q96K76 GUK1-205ENST00000366722 850 ntTSL 3 BASIC30.89■■■□□ 2.54
USP47Q96K76 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC30.89■■■□□ 2.54
USP47Q96K76 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC30.89■■■□□ 2.54
USP47Q96K76 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC30.89■■■□□ 2.53
USP47Q96K76 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.53
USP47Q96K76 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
USP47Q96K76 TSPY26P-201ENST00000476365 1326 ntBASIC30.88■■■□□ 2.53
USP47Q96K76 HYI-206ENST00000372434 1025 ntTSL 5 BASIC30.88■■■□□ 2.53
USP47Q96K76 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC30.88■■■□□ 2.53
USP47Q96K76 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC30.88■■■□□ 2.53
USP47Q96K76 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
USP47Q96K76 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
USP47Q96K76 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
USP47Q96K76 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
USP47Q96K76 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
USP47Q96K76 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
USP47Q96K76 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
USP47Q96K76 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
USP47Q96K76 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC30.87■■■□□ 2.53
USP47Q96K76 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
USP47Q96K76 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC30.87■■■□□ 2.53
USP47Q96K76 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
USP47Q96K76 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
USP47Q96K76 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC30.86■■■□□ 2.53
USP47Q96K76 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC30.86■■■□□ 2.53
USP47Q96K76 AICDA-202ENST00000537228 667 ntTSL 5 BASIC30.86■■■□□ 2.53
USP47Q96K76 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
USP47Q96K76 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC30.86■■■□□ 2.53
USP47Q96K76 AC068473.5-201ENST00000616428 2072 ntBASIC30.86■■■□□ 2.53
USP47Q96K76 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC30.86■■■□□ 2.53
USP47Q96K76 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
USP47Q96K76 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
USP47Q96K76 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
USP47Q96K76 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms