Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LRCH3Q96II8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
LRCH3Q96II8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRCH3Q96II8 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRCH3Q96II8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRCH3Q96II8 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRCH3Q96II8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRCH3Q96II8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRCH3Q96II8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
LRCH3Q96II8 IRX5-204ENST00000560154 879 ntTSL 5 BASIC23.98■■□□□ 1.43
LRCH3Q96II8 AC142381.4-202ENST00000563973 229 ntBASIC23.98■■□□□ 1.43
LRCH3Q96II8 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC23.98■■□□□ 1.43
LRCH3Q96II8 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRCH3Q96II8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRCH3Q96II8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
LRCH3Q96II8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRCH3Q96II8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.98■■□□□ 1.43
LRCH3Q96II8 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LRCH3Q96II8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
LRCH3Q96II8 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LRCH3Q96II8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.97■■□□□ 1.43
LRCH3Q96II8 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
LRCH3Q96II8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.97■■□□□ 1.43
LRCH3Q96II8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LRCH3Q96II8 RARRES2P4-201ENST00000514074 484 ntBASIC23.97■■□□□ 1.43
LRCH3Q96II8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC23.97■■□□□ 1.43
LRCH3Q96II8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.97■■□□□ 1.43
LRCH3Q96II8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LRCH3Q96II8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.97■■□□□ 1.43
LRCH3Q96II8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
LRCH3Q96II8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.97■■□□□ 1.43
LRCH3Q96II8 AC096887.2-201ENST00000623443 1957 ntBASIC23.97■■□□□ 1.43
LRCH3Q96II8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.97■■□□□ 1.43
LRCH3Q96II8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LRCH3Q96II8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LRCH3Q96II8 BX005040.4-201ENST00000637145 1518 ntBASIC23.96■■□□□ 1.43
LRCH3Q96II8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LRCH3Q96II8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LRCH3Q96II8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.96■■□□□ 1.43
LRCH3Q96II8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
LRCH3Q96II8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC23.96■■□□□ 1.43
LRCH3Q96II8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.96■■□□□ 1.43
LRCH3Q96II8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.96■■□□□ 1.43
LRCH3Q96II8 AC092118.2-201ENST00000613495 667 ntBASIC23.96■■□□□ 1.43
LRCH3Q96II8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
LRCH3Q96II8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.95■■□□□ 1.43
LRCH3Q96II8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.95■■□□□ 1.42
LRCH3Q96II8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.95■■□□□ 1.42
LRCH3Q96II8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.95■■□□□ 1.42
LRCH3Q96II8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.95■■□□□ 1.42
LRCH3Q96II8 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
LRCH3Q96II8 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.94■■□□□ 1.42
LRCH3Q96II8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
LRCH3Q96II8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.94■■□□□ 1.42
LRCH3Q96II8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRCH3Q96II8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRCH3Q96II8 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.94■■□□□ 1.42
LRCH3Q96II8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
LRCH3Q96II8 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LRCH3Q96II8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRCH3Q96II8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.93■■□□□ 1.42
LRCH3Q96II8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
LRCH3Q96II8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.93■■□□□ 1.42
LRCH3Q96II8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRCH3Q96II8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LRCH3Q96II8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRCH3Q96II8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.93■■□□□ 1.42
LRCH3Q96II8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LRCH3Q96II8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.93■■□□□ 1.42
LRCH3Q96II8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LRCH3Q96II8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LRCH3Q96II8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRCH3Q96II8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.93■■□□□ 1.42
LRCH3Q96II8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.92■■□□□ 1.42
LRCH3Q96II8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LRCH3Q96II8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
LRCH3Q96II8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
LRCH3Q96II8 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
LRCH3Q96II8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.92■■□□□ 1.42
LRCH3Q96II8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
LRCH3Q96II8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRCH3Q96II8 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.91■■□□□ 1.42
LRCH3Q96II8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRCH3Q96II8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LRCH3Q96II8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
LRCH3Q96II8 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
LRCH3Q96II8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.91■■□□□ 1.42
LRCH3Q96II8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
LRCH3Q96II8 UNC93B4-201ENST00000505679 747 ntBASIC23.91■■□□□ 1.42
LRCH3Q96II8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.91■■□□□ 1.42
LRCH3Q96II8 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.91■■□□□ 1.42
LRCH3Q96II8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.91■■□□□ 1.42
LRCH3Q96II8 MIR4758-201ENST00000577688 71 ntBASIC23.91■■□□□ 1.42
LRCH3Q96II8 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.91■■□□□ 1.42
LRCH3Q96II8 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
LRCH3Q96II8 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.9■■□□□ 1.42
LRCH3Q96II8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
LRCH3Q96II8 ESRRAP1-201ENST00000400596 1257 ntBASIC23.9■■□□□ 1.42
LRCH3Q96II8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.9■■□□□ 1.42
LRCH3Q96II8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms