Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NAF1Q96HR8 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
NAF1Q96HR8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.02■■□□□ 1.12
NAF1Q96HR8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NAF1Q96HR8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NAF1Q96HR8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
NAF1Q96HR8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NAF1Q96HR8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NAF1Q96HR8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NAF1Q96HR8 MIR939-201ENST00000401314 82 ntBASIC22.02■■□□□ 1.12
NAF1Q96HR8 AP001330.3-201ENST00000520123 633 ntBASIC22.02■■□□□ 1.12
NAF1Q96HR8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NAF1Q96HR8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.02■■□□□ 1.12
NAF1Q96HR8 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NAF1Q96HR8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NAF1Q96HR8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NAF1Q96HR8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
NAF1Q96HR8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NAF1Q96HR8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.02■■□□□ 1.11
NAF1Q96HR8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
NAF1Q96HR8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.01■■□□□ 1.11
NAF1Q96HR8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NAF1Q96HR8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NAF1Q96HR8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.01■■□□□ 1.11
NAF1Q96HR8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NAF1Q96HR8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NAF1Q96HR8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.01■■□□□ 1.11
NAF1Q96HR8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NAF1Q96HR8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22■■□□□ 1.11
NAF1Q96HR8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22■■□□□ 1.11
NAF1Q96HR8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
NAF1Q96HR8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
NAF1Q96HR8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NAF1Q96HR8 AC097381.1-201ENST00000429019 1296 ntBASIC22■■□□□ 1.11
NAF1Q96HR8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
NAF1Q96HR8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
NAF1Q96HR8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22■■□□□ 1.11
NAF1Q96HR8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22■■□□□ 1.11
NAF1Q96HR8 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22■■□□□ 1.11
NAF1Q96HR8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22■■□□□ 1.11
NAF1Q96HR8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NAF1Q96HR8 PKD1P6-201ENST00000343738 4769 ntBASIC21.99■■□□□ 1.11
NAF1Q96HR8 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NAF1Q96HR8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.99■■□□□ 1.11
NAF1Q96HR8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
NAF1Q96HR8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
NAF1Q96HR8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
NAF1Q96HR8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NAF1Q96HR8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.98■■□□□ 1.11
NAF1Q96HR8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NAF1Q96HR8 AC004448.1-201ENST00000458332 883 ntBASIC21.98■■□□□ 1.11
NAF1Q96HR8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NAF1Q96HR8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.98■■□□□ 1.11
NAF1Q96HR8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NAF1Q96HR8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NAF1Q96HR8 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.98■■□□□ 1.11
NAF1Q96HR8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NAF1Q96HR8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NAF1Q96HR8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NAF1Q96HR8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NAF1Q96HR8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NAF1Q96HR8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.97■■□□□ 1.11
NAF1Q96HR8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NAF1Q96HR8 AC091305.1-201ENST00000479476 895 ntBASIC21.97■■□□□ 1.11
NAF1Q96HR8 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.97■■□□□ 1.11
NAF1Q96HR8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NAF1Q96HR8 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NAF1Q96HR8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
NAF1Q96HR8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NAF1Q96HR8 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NAF1Q96HR8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.97■■□□□ 1.11
NAF1Q96HR8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NAF1Q96HR8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NAF1Q96HR8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.96■■□□□ 1.11
NAF1Q96HR8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.96■■□□□ 1.11
NAF1Q96HR8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NAF1Q96HR8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NAF1Q96HR8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.96■■□□□ 1.11
NAF1Q96HR8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.96■■□□□ 1.11
NAF1Q96HR8 MIR4767-201ENST00000582827 78 ntBASIC21.96■■□□□ 1.11
NAF1Q96HR8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NAF1Q96HR8 AC090877.2-201ENST00000558441 1738 ntBASIC21.96■■□□□ 1.11
NAF1Q96HR8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
NAF1Q96HR8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NAF1Q96HR8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NAF1Q96HR8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
NAF1Q96HR8 SYT6-210ENST00000641643 1587 ntBASIC21.95■■□□□ 1.11
NAF1Q96HR8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NAF1Q96HR8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NAF1Q96HR8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NAF1Q96HR8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.95■■□□□ 1.1
NAF1Q96HR8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NAF1Q96HR8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
NAF1Q96HR8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NAF1Q96HR8 DUX4L19-201ENST00000557448 1267 ntBASIC21.95■■□□□ 1.1
NAF1Q96HR8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.95■■□□□ 1.1
NAF1Q96HR8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NAF1Q96HR8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NAF1Q96HR8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NAF1Q96HR8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms