Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 AL354811.1-201ENST00000610286 706 ntBASIC18.46■□□□□ 0.55
TIMD4Q96H15 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.46■□□□□ 0.55
TIMD4Q96H15 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
TIMD4Q96H15 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TIMD4Q96H15 ANOS2P-203ENST00000472227 1816 ntBASIC18.46■□□□□ 0.55
TIMD4Q96H15 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
TIMD4Q96H15 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMD4Q96H15 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMD4Q96H15 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TIMD4Q96H15 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.45■□□□□ 0.54
TIMD4Q96H15 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMD4Q96H15 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.45■□□□□ 0.54
TIMD4Q96H15 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.45■□□□□ 0.54
TIMD4Q96H15 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMD4Q96H15 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.45■□□□□ 0.54
TIMD4Q96H15 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TIMD4Q96H15 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.45■□□□□ 0.54
TIMD4Q96H15 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TIMD4Q96H15 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.45■□□□□ 0.54
TIMD4Q96H15 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMD4Q96H15 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.44■□□□□ 0.54
TIMD4Q96H15 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMD4Q96H15 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMD4Q96H15 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMD4Q96H15 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMD4Q96H15 AC092068.2-201ENST00000590491 1708 ntBASIC18.44■□□□□ 0.54
TIMD4Q96H15 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.44■□□□□ 0.54
TIMD4Q96H15 AC097381.1-201ENST00000429019 1296 ntBASIC18.44■□□□□ 0.54
TIMD4Q96H15 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TIMD4Q96H15 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.44■□□□□ 0.54
TIMD4Q96H15 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.44■□□□□ 0.54
TIMD4Q96H15 MIR6821-201ENST00000617625 74 ntBASIC18.44■□□□□ 0.54
TIMD4Q96H15 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMD4Q96H15 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.44■□□□□ 0.54
TIMD4Q96H15 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.44■□□□□ 0.54
TIMD4Q96H15 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.44■□□□□ 0.54
TIMD4Q96H15 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMD4Q96H15 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.44■□□□□ 0.54
TIMD4Q96H15 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TIMD4Q96H15 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMD4Q96H15 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TIMD4Q96H15 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMD4Q96H15 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMD4Q96H15 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.43■□□□□ 0.54
TIMD4Q96H15 AC026271.2-201ENST00000428091 497 ntBASIC18.43■□□□□ 0.54
TIMD4Q96H15 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMD4Q96H15 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TIMD4Q96H15 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.43■□□□□ 0.54
TIMD4Q96H15 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TIMD4Q96H15 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TIMD4Q96H15 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMD4Q96H15 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIMD4Q96H15 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
TIMD4Q96H15 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIMD4Q96H15 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TIMD4Q96H15 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.42■□□□□ 0.54
TIMD4Q96H15 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMD4Q96H15 AC012414.1-201ENST00000556676 535 ntBASIC18.42■□□□□ 0.54
TIMD4Q96H15 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.42■□□□□ 0.54
TIMD4Q96H15 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMD4Q96H15 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMD4Q96H15 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TIMD4Q96H15 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIMD4Q96H15 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
TIMD4Q96H15 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIMD4Q96H15 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TIMD4Q96H15 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIMD4Q96H15 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.41■□□□□ 0.54
TIMD4Q96H15 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIMD4Q96H15 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIMD4Q96H15 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.41■□□□□ 0.54
TIMD4Q96H15 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TIMD4Q96H15 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.41■□□□□ 0.54
TIMD4Q96H15 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIMD4Q96H15 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TIMD4Q96H15 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.41■□□□□ 0.54
TIMD4Q96H15 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TIMD4Q96H15 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIMD4Q96H15 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIMD4Q96H15 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIMD4Q96H15 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIMD4Q96H15 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.4■□□□□ 0.54
TIMD4Q96H15 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.4■□□□□ 0.54
TIMD4Q96H15 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.4■□□□□ 0.54
TIMD4Q96H15 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIMD4Q96H15 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.4■□□□□ 0.54
TIMD4Q96H15 AC105233.4-201ENST00000642045 216 ntBASIC18.4■□□□□ 0.54
TIMD4Q96H15 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TIMD4Q96H15 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIMD4Q96H15 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIMD4Q96H15 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIMD4Q96H15 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TIMD4Q96H15 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.4■□□□□ 0.54
TIMD4Q96H15 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIMD4Q96H15 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TIMD4Q96H15 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TIMD4Q96H15 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.39■□□□□ 0.54
TIMD4Q96H15 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMD4Q96H15 YBX1P1-201ENST00000445822 960 ntBASIC18.39■□□□□ 0.53
TIMD4Q96H15 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms