Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AC021242.3-201ENST00000607598 1377 ntBASIC19■□□□□ 0.63
CPNE2Q96FN4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE2Q96FN4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19■□□□□ 0.63
CPNE2Q96FN4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE2Q96FN4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CPNE2Q96FN4 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CPNE2Q96FN4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPNE2Q96FN4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 KRT125P-201ENST00000546827 989 ntBASIC18.97■□□□□ 0.63
CPNE2Q96FN4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPNE2Q96FN4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 AC092053.2-201ENST00000640557 1818 ntBASIC18.96■□□□□ 0.63
CPNE2Q96FN4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CPNE2Q96FN4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPNE2Q96FN4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE2Q96FN4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.94■□□□□ 0.62
CPNE2Q96FN4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CPNE2Q96FN4 AC137767.1-201ENST00000602918 1920 ntBASIC18.94■□□□□ 0.62
CPNE2Q96FN4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.94■□□□□ 0.62
CPNE2Q96FN4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE2Q96FN4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CPNE2Q96FN4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE2Q96FN4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CPNE2Q96FN4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE2Q96FN4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CPNE2Q96FN4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.94■□□□□ 0.62
CPNE2Q96FN4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 DUX4L4-201ENST00000566884 1269 ntBASIC18.93■□□□□ 0.62
CPNE2Q96FN4 Z92544.1-202ENST00000571933 1220 ntBASIC18.93■□□□□ 0.62
CPNE2Q96FN4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CPNE2Q96FN4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms