Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM11Q96F44 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.24■■□□□ 1.31
TRIM11Q96F44 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM11Q96F44 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM11Q96F44 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
TRIM11Q96F44 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM11Q96F44 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.24■■□□□ 1.31
TRIM11Q96F44 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.24■■□□□ 1.31
TRIM11Q96F44 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM11Q96F44 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TRIM11Q96F44 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.23■■□□□ 1.31
TRIM11Q96F44 AC080038.3-201ENST00000623346 1952 ntBASIC23.23■■□□□ 1.31
TRIM11Q96F44 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM11Q96F44 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM11Q96F44 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
TRIM11Q96F44 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.23■■□□□ 1.31
TRIM11Q96F44 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM11Q96F44 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM11Q96F44 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TRIM11Q96F44 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
TRIM11Q96F44 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
TRIM11Q96F44 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
TRIM11Q96F44 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.23■■□□□ 1.31
TRIM11Q96F44 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.22■■□□□ 1.31
TRIM11Q96F44 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.22■■□□□ 1.31
TRIM11Q96F44 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.22■■□□□ 1.31
TRIM11Q96F44 MIR3621-201ENST00000580529 85 ntBASIC23.22■■□□□ 1.31
TRIM11Q96F44 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.22■■□□□ 1.31
TRIM11Q96F44 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM11Q96F44 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM11Q96F44 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM11Q96F44 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TRIM11Q96F44 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM11Q96F44 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.21■■□□□ 1.31
TRIM11Q96F44 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM11Q96F44 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM11Q96F44 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.21■■□□□ 1.31
TRIM11Q96F44 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIM11Q96F44 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TRIM11Q96F44 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.21■■□□□ 1.31
TRIM11Q96F44 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TRIM11Q96F44 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.21■■□□□ 1.31
TRIM11Q96F44 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
TRIM11Q96F44 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.2■■□□□ 1.3
TRIM11Q96F44 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM11Q96F44 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TRIM11Q96F44 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TRIM11Q96F44 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM11Q96F44 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TRIM11Q96F44 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM11Q96F44 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TRIM11Q96F44 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM11Q96F44 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.2■■□□□ 1.3
TRIM11Q96F44 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.2■■□□□ 1.3
TRIM11Q96F44 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM11Q96F44 CA15P2-201ENST00000611168 834 ntBASIC23.2■■□□□ 1.3
TRIM11Q96F44 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
TRIM11Q96F44 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM11Q96F44 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TRIM11Q96F44 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TRIM11Q96F44 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM11Q96F44 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM11Q96F44 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM11Q96F44 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TRIM11Q96F44 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM11Q96F44 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM11Q96F44 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TRIM11Q96F44 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.19■■□□□ 1.3
TRIM11Q96F44 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.19■■□□□ 1.3
TRIM11Q96F44 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM11Q96F44 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM11Q96F44 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
TRIM11Q96F44 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM11Q96F44 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TRIM11Q96F44 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM11Q96F44 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM11Q96F44 LINC00565-201ENST00000562710 2331 ntBASIC23.18■■□□□ 1.3
TRIM11Q96F44 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM11Q96F44 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM11Q96F44 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
TRIM11Q96F44 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM11Q96F44 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
TRIM11Q96F44 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM11Q96F44 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.18■■□□□ 1.3
TRIM11Q96F44 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.18■■□□□ 1.3
TRIM11Q96F44 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM11Q96F44 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TRIM11Q96F44 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM11Q96F44 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM11Q96F44 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM11Q96F44 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TRIM11Q96F44 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM11Q96F44 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.17■■□□□ 1.3
TRIM11Q96F44 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.17■■□□□ 1.3
TRIM11Q96F44 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM11Q96F44 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
TRIM11Q96F44 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
TRIM11Q96F44 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TRIM11Q96F44 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.16■■□□□ 1.3
TRIM11Q96F44 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms