Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCD3Q96EY7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCD3Q96EY7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTCD3Q96EY7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.8■■□□□ 1.08
PTCD3Q96EY7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PTCD3Q96EY7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 AC026310.3-201ENST00000625186 2373 ntBASIC21.79■■□□□ 1.08
PTCD3Q96EY7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.79■■□□□ 1.08
PTCD3Q96EY7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD3Q96EY7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD3Q96EY7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD3Q96EY7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCD3Q96EY7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
PTCD3Q96EY7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
PTCD3Q96EY7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.78■■□□□ 1.08
PTCD3Q96EY7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD3Q96EY7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD3Q96EY7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTCD3Q96EY7 AC005703.6-201ENST00000623265 1329 ntBASIC21.78■■□□□ 1.08
PTCD3Q96EY7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 MTDHP2-201ENST00000601468 714 ntBASIC21.77■■□□□ 1.08
PTCD3Q96EY7 AC079630.1-202ENST00000618127 1840 ntBASIC21.77■■□□□ 1.08
PTCD3Q96EY7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PTCD3Q96EY7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.77■■□□□ 1.07
PTCD3Q96EY7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
PTCD3Q96EY7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD3Q96EY7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD3Q96EY7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD3Q96EY7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.76■■□□□ 1.07
PTCD3Q96EY7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.76■■□□□ 1.07
PTCD3Q96EY7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD3Q96EY7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD3Q96EY7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PTCD3Q96EY7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
PTCD3Q96EY7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCD3Q96EY7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCD3Q96EY7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PTCD3Q96EY7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
PTCD3Q96EY7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
PTCD3Q96EY7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.75■■□□□ 1.07
PTCD3Q96EY7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCD3Q96EY7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTCD3Q96EY7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 AL035685.1-201ENST00000636663 812 ntBASIC21.74■■□□□ 1.07
PTCD3Q96EY7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTCD3Q96EY7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.73■■□□□ 1.07
PTCD3Q96EY7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.73■■□□□ 1.07
PTCD3Q96EY7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.73■■□□□ 1.07
PTCD3Q96EY7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD3Q96EY7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTCD3Q96EY7 AC080038.3-201ENST00000623346 1952 ntBASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms