Protein–RNA interactions for Protein: Q96DA2

RAB39B, Ras-related protein Rab-39B, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39BQ96DA2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RAB39BQ96DA2 ABCB10P4-201ENST00000566803 2184 ntBASIC18.72■□□□□ 0.59
RAB39BQ96DA2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 RASA4CP-201ENST00000424092 1398 ntBASIC18.72■□□□□ 0.59
RAB39BQ96DA2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 ZNRF2P3-201ENST00000424200 374 ntBASIC18.72■□□□□ 0.59
RAB39BQ96DA2 AC105265.2-201ENST00000467189 838 ntBASIC18.72■□□□□ 0.59
RAB39BQ96DA2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RAB39BQ96DA2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 AC006455.2-201ENST00000429931 906 ntBASIC18.71■□□□□ 0.59
RAB39BQ96DA2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 MIR3181-201ENST00000578512 73 ntBASIC18.71■□□□□ 0.59
RAB39BQ96DA2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.71■□□□□ 0.59
RAB39BQ96DA2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 AL024507.2-201ENST00000606070 2574 ntBASIC18.7■□□□□ 0.58
RAB39BQ96DA2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RAB39BQ96DA2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 AC008764.7-201ENST00000593779 1081 ntBASIC18.69■□□□□ 0.58
RAB39BQ96DA2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 pRNA.6-201ENST00000610482 90 ntBASIC18.69■□□□□ 0.58
RAB39BQ96DA2 CA15P2-201ENST00000611168 834 ntBASIC18.69■□□□□ 0.58
RAB39BQ96DA2 pRNA.5-201ENST00000612139 90 ntBASIC18.69■□□□□ 0.58
RAB39BQ96DA2 pRNA.11-201ENST00000618423 90 ntBASIC18.69■□□□□ 0.58
RAB39BQ96DA2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 pRNA.13-201ENST00000619112 90 ntBASIC18.69■□□□□ 0.58
RAB39BQ96DA2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RAB39BQ96DA2 AL117328.2-201ENST00000624617 1940 ntBASIC18.68■□□□□ 0.58
RAB39BQ96DA2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB39BQ96DA2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB39BQ96DA2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms